Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0169 ATGTTTCCGAAGGAAAATGGTAACGGCTACCACCACCACCACCACGAGGTTCCACCACCGGGAATGGGAAACGGAGACAGTGTCCGCCGTGTCACGCGCAGGCCACGCGCCTCCAGTTCCACTTCTACTTCCAGTGACACCCTTCCCGTCGTTAGGGTTCCTGAACAGCAGCAGTTGCAACAACAGCGCCTTCCTTGTACGGAATTCGACATGGCGTATTTCAATTCTTATTCTCACCTTGGTATCCACCAAGAAATGATTAAGGATCGTGTGCGGACTGAAACTTATAGGGAAGCAGTCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTACTTGATGTGGGATGCGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCCGTTGATGCCAGTGACATTGCCCTGAAGGCACATGACATTGTGGAAGCAAATAATCTGTCTGATGTTGTGGTCGTATTACATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACGGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAACGCATCGTTGTACATGGCTCCTGTAACACATGCTGACAGATACAGTGAATACATCGATTTCTGGCGCAACGTATATGGAATTAATATGTCTCCGATGATCTCATTAGCAAAACAGTCTGCGTCAGAAGAACCTTCTGTGGAGACAATAACTGGCGAGAATATTTTGACATGGCCGCATGAGGTAAAATACATTGATTCTTATTCTATTACCATCCACGAGCTAGAAACTATAACATCAAGCTTTAAGTTCAATTCAATGATGCGGGCACCACTACATGGTTTTGCATTTTGGTTTGATGTCGAATTTAACGGGCCTGCAATACAACCAATCAATTCTCATTCAACTTCATCTACTAACAATCATTTGGCGAATGGTAATCAGAGAAGAAAGAGGACAAATCCTAATGATGCACTGGTCCTGTCTACTGCACCTGAAAACCCTCCAACGCATTGGCAGCAGACATTGATTTACTTTTATGAGCCAATAGCACTGGAACAAGATCAACCGATTGAAGGTTCAATCACATTGTCACAAAACAAAGAAAACGCTCGATTTATTAACATTAACCTTGAATATTCTGTTGGTGGTCGATCCTACGTGAAACAATCTGTTATGAAATGA 1263 0.4371 MFPKENGNGYHHHHHEVPPPGMGNGDSVRRVTRRPRASSSTSTSSDTLPVVRVPEQQQLQQQRLPCTEFDMAYFNSYSHLGIHQEMIKDRVRTETYREAVMRHQSFIAGKVVLDVGCGTGILSIFCAQAGAKRVYAVDASDIALKAHDIVEANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNASLYMAPVTHADRYSEYIDFWRNVYGINMSPMISLAKQSASEEPSVETITGENILTWPHEVKYIDSYSITIHELETITSSFKFNSMMRAPLHGFAFWFDVEFNGPAIQPINSHSTSSTNNHLANGNQRRKRTNPNDALVLSTAPENPPTHWQQTLIYFYEPIALEQDQPIEGSITLSQNKENARFININLEYSVGGRSYVKQSVMK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0169 420 CDD AdoMet_MTases 112 211 - -
Lan9g0169 420 Gene3D - 214 419 - -
Lan9g0169 420 Pfam Ribosomal protein L11 methyltransferase (PrmA) 108 182 - -
Lan9g0169 420 PANTHER BNAC03G41340D PROTEIN 29 417 - -
Lan9g0169 420 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 70 420 IPR025799 GO:0016274|GO:0018216
Lan9g0169 420 MobiDBLite consensus disorder prediction 323 347 - -
Lan9g0169 420 MobiDBLite consensus disorder prediction 1 50 - -
Lan9g0169 420 MobiDBLite consensus disorder prediction 34 50 - -
Lan9g0169 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 410 IPR029063 -
Lan9g0169 420 Gene3D Vaccinia Virus protein VP39 67 212 IPR029063 -
Lan9g0169 420 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 29 417 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0169 Lan-Chr9 1952090 1972778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0169 73 378 C2H2 Transcription Factor Family AT3G12270 39.564 4.92e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0169 K11437 - gmx:100809174 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1132 11 15472791 15489279 Lan9g0169 9 1952090 1972778 LSH