Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0155 ATGGCTGCATCTTCTTCAGCAGCATCACTTCTTGGAATCAGAGAAGTGGATCAGAATCAGATGAACCAACAACAATCCTCAACACCATCATCATCAACAACTCCAGCTGCACCACCACAGAAGAAAAGAAGAAACCAACATGGAACACCATATCCAGATGCGGAAGTAATAGCAATATCTCCAAAGACCCTGATGGCAACAAACAGATTTATATGTGAAGTTTGCAACAAAGGGTTCCAAAGGGAGCAAAACTTACAGCTCCATAGAAGAGGACACAACCTTCCTTGGAAGCTAAAGCAGAAAAGTACAAAAGAGCAAAAGAGAAAGGTTTATATGTGTCCTGAACCCACATGTGTTCACCATGACCCTTCAAGGGCTCTTGGAGATCTCACTGGGATTAAGAAACATTACTCTCGTAAGCATGGTGAGAAGAAATGGAAGTGTGAGAAATGCTCTAAGAAATATGCTGTTCAATCAGATTGGAAAGCTCATTCTAAGACTTGTGGCACAAGAGAATATAGATGTGACTGTGGCACTCTCTTCTCCAGACGAGACAGTTTCATCACCCACAGGGCCTTCTGTGATGCATTAGCTCATGAAAGTGCAAGACAACAACCAAACCTGAACAGTGCCATTGGAAGCCAATTGTACGGAAATAGCAGCATGACCTTAGCTATATCTCAAGTAGGTTCCATCAATGACCAGAATAACCACCAATCAGGTGACCAATTGTGCCTACGTCCCACGACAGCCGGTCAATTTGACCACATTCTCCAACAATCACTTGGCTCATCAACCTTTAAACCTTTAGAAACCATGCACTCTTCTCCATTCTTCATGCCAGATGAACCAAACCAAAACCAAAACTATCAAAACAAAGCATTATTTCAGGGACTATTACAATTGGCTGATCTTAACAACAATCACAACAACAATCCGTTCTGCAACATCAATAGCAAAAACAACTTATCTGAACATATCAACAATGATCAAGGGTCTAATTTCTTCTCCATAATGAGTGATCATAATCAAACAAGCACCACTACCAATGCTCCTTCTCTATTCAGCTCATCTGTACAACATAGCAGTGGCTCCATTTCTCACATGTCCGCAACTGCATTGCTGCAAAAAGCTGCTCAAATGGGTGCAAGTTCAAGTAACAACAATAATACTGCCTCCTCTATTCTCAGAAGTTTCAGAAGCACTACCTCCAACAGTGATCAGAGGCCACTTTCTTCTGCAAACTTTGACACCATTTTCAGCGGAAACAACAACAACCTGCAAGAGTTGATGAACTCTTTTGTTGTTAGTGGAAACTCTCCCATATTGGAAAATGGTTCTTCATCTTCTTCTGCAGCTAGGTTTAGTACTGGGTTTGAAGCATATGATAACAATAGCATAAATAGAGAGCCAAAACTGCATTCAGTGAGCATTGGAGGCTCTGATAAACTCAGTACTAGAGACTTTCTTGGAGTTGGTCAAATAGTAAGAAGCATGAGTGGAGGAGTTTCACATAGAGAGCAACAACAGCAACAGCAAAATACTGCACCATCAGATCAATCTTTTGGAGATGGAGGGAACTTTCTCAGCGAGTGA 1596 0.4148 MAASSSAASLLGIREVDQNQMNQQQSSTPSSSTTPAAPPQKKRRNQHGTPYPDAEVIAISPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEQKRKVYMCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARQQPNLNSAIGSQLYGNSSMTLAISQVGSINDQNNHQSGDQLCLRPTTAGQFDHILQQSLGSSTFKPLETMHSSPFFMPDEPNQNQNYQNKALFQGLLQLADLNNNHNNNPFCNINSKNNLSEHINNDQGSNFFSIMSDHNQTSTTTNAPSLFSSSVQHSSGSISHMSATALLQKAAQMGASSSNNNNTASSILRSFRSTTSNSDQRPLSSANFDTIFSGNNNNLQELMNSFVVSGNSPILENGSSSSSAARFSTGFEAYDNNSINREPKLHSVSIGGSDKLSTRDFLGVGQIVRSMSGGVSHREQQQQQQNTAPSDQSFGDGGNFLSE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0155 531 MobiDBLite consensus disorder prediction 1 40 - -
Lan9g0155 531 MobiDBLite consensus disorder prediction 501 531 - -
Lan9g0155 531 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Lan9g0155 531 MobiDBLite consensus disorder prediction 1 52 - -
Lan9g0155 531 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
Lan9g0155 531 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 508 - -
Lan9g0155 531 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 508 - -
Lan9g0155 531 Gene3D Classic Zinc Finger 124 204 - -
Lan9g0155 531 MobiDBLite consensus disorder prediction 500 531 - -
Lan9g0155 531 SMART c2h2final6 70 92 IPR013087 -
Lan9g0155 531 SMART c2h2final6 111 141 IPR013087 -
Lan9g0155 531 SMART c2h2final6 146 166 IPR013087 -
Lan9g0155 531 Pfam Zinc-finger double-stranded RNA-binding 70 92 IPR022755 -
Lan9g0155 531 Gene3D Classic Zinc Finger 53 119 - -
Lan9g0155 531 SUPERFAMILY beta-beta-alpha zinc fingers 69 166 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0155 Lan-Chr9 1763268 1768659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0155 40 242 IDZ Gene Family AT2G02070 77.570 4.90e-113 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g0155 zf-C2H2_jaz 3.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0155 K25870 - jre:109006348 566.614