Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0150 ATGGGTTATACATGTGATTTTTGTGGAGAGCAGAGGTCCATGGTGTACTGCCGCTCTGATGCTGCATGCTTATGTTTGTCATGTGATAGAAATGTTCATTCTGCTAATGCCCTTTCTAAGCGCCACTCACGAACCCTTTTATGCGAGAGATGTAGTTCGCAACCTGCATTTGTGAGGTGTGCTGAAGAGAAAGTTTCGCTTTGTCAGAACTGTGATTGGTTGGGTCACGGTTTGACTACATCTTATTCAACACATAAGAGAGAAACAATCAATTGCTACTCTGGGTGCCCTTCATCAGAAGAACTGTCTTCTATATGGTCATTAGTCTTAGATATCCCTTCTATGAGTGGATCTACATGTGAGCAGGAACTAGGTTCAATGAGTATTAATGAGAACAGCAATAAAAGTTCTTGGGTTCCTCTAGAAAATCAGAATGTGACTGGTTCAGATCAAGTTAATGATCTACCCGGTAAGGGTAAGCCTTCAGTTGGGACTTCTTGTAAACCTGAGTCAAGCGCAGAACCTCGTGTTATGGACCACCCAGATGGACCTTCCACTCAAGGTCTGCCAAAGTTCTACTGTCCTGGTACAAAATGCCCTTCAATATGTGAAGATAATATGTATCCTGATTTTGACATGGATGAAGTGGATCTAAATCTTGAGAACTATGATGAACTTTTTGGCATGACTCTCACTCATTCTGAAGAGCTCTTCGAAAATGGTGGATTTGATAGCTTGTTTGGGACAAAGGACATATCTGCTGAAGATTCTGATTGTCTGGGTGCTGCTGCTGCTGAGGGGTCACAATCGGCATGCAGCAATGCAGAATCTGCAGATTCCATATTGAGTACTAAAACTGAACCAATAATTTGTTTTACGTCAAGGCAAGCCCCATCAAACCTTTCTTTTTCTGGCATAGTGGGAGAGACTAATGCTAGAGACTATCAAGACTGTGGGGCTTCTACAATGCTTCTCATGGGAGACCCTCCATGTCCTGATACTTTCCGACATTCTGCTGCTAACCGCAGTAATGCTGTCATGCGTTATAAGGAAAAGAAGAAGATTCGCAAGTTTGACAAGAGAGTGAGGTATGCTTCTCGCAAAGAACGGGCTGATGTCAGAAAGCGCGTGAAGGGCCGGTTCGTCAAAGTTGGTGATGCCTATGATTATGACCCTATGAGCCCATCCAGAAGCTACTGA 1200 0.435 MGYTCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCERCSSQPAFVRCAEEKVSLCQNCDWLGHGLTTSYSTHKRETINCYSGCPSSEELSSIWSLVLDIPSMSGSTCEQELGSMSINENSNKSSWVPLENQNVTGSDQVNDLPGKGKPSVGTSCKPESSAEPRVMDHPDGPSTQGLPKFYCPGTKCPSICEDNMYPDFDMDEVDLNLENYDELFGMTLTHSEELFENGGFDSLFGTKDISAEDSDCLGAAAAEGSQSACSNAESADSILSTKTEPIICFTSRQAPSNLSFSGIVGETNARDYQDCGASTMLLMGDPPCPDTFRHSAANRSNAVMRYKEKKKIRKFDKRVRYASRKERADVRKRVKGRFVKVGDAYDYDPMSPSRSY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0150 399 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 399 - -
Lan9g0150 399 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 399 - -
Lan9g0150 399 MobiDBLite consensus disorder prediction 131 187 - -
Lan9g0150 399 Pfam CCT motif 342 384 IPR010402 GO:0005515
Lan9g0150 399 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lan9g0150 399 SMART bboxneu5 48 90 IPR000315 GO:0008270
Lan9g0150 399 SMART bboxneu5 4 47 IPR000315 GO:0008270
Lan9g0150 399 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Lan9g0150 399 CDD Bbox1_BBX-like 5 47 - -
Lan9g0150 399 CDD Bbox1_BBX-like 47 87 - -
Lan9g0150 399 ProSiteProfiles CCT domain profile. 342 384 IPR010402 GO:0005515
Lan9g0150 399 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0150 Lan-Chr9 1705905 1709087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0150 1 399 C2C2-CO-like Transcription Factor Family AT5G48250 56.416 1.63e-147 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lan9g0150 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0150 - - gmx:100800832 595.504