Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0148 ATGAAGCGGGCGATCTCGATGGAATGCTTAGAGGGAAGATCTGTAGTAGAACTTGAAAATGCTAGCCTACTTGGACCTTCTTCATTTCAAAGAAAAAGCCTATCTTTTGCAGAGGTTTCACCAATTGATCATGACTGTGAGAAGTTCTCTCAAGATGTAGTAAGAAGTAAGGTTCTTAGCAGCATAAAAGTTGTAGTTCTTTCCACCAAGATAAATTTACTCATGCCTTTTGGCCCCATGGCAATTTTGGTACATAATTTGTTTGATAGTCATGGATTGGTCTTTCTTTTTTGCTTATTGGGCATCATACCCTTGGCTGAGCGTTTGGGCTATACAACAGAACAACTAGCTTTGTTTACTGGACCTGCAGTTGGAGGTCTTTTATATGCCACATTTGGAAACGCAACAGAACTAATTATATCAATACATGCCCTGAAAAGTGGTTTCATTCATCTGGTTCAACAATCACTACTAGGCTCAATATTGTCAAACCTGTTGCTAGTGCTTGGATGTGCATTATTTGCTGGTGGAGTAGTGTTTTATAAGAGAGAACAATCATTTAACCATGCAGATACTAGTGTGGATTTTGGATTACTATTGATGGCAGTAATGGGTCTGATATTTCCAGCAGTTCTCCATGCTACACACACAGAATTAGAAAATGAGAAATCTCAGTTAAATCTTTCAAGGTTTACAAGTTGCATTTTACTTGTGGCTTATGTTTGCTATATAGTGTTTCAAGTGAAGAGTCAAAAGAATTTACCAGCCCTAGTGGAAGAGGATGGAGGTCTCAATAAAGAGACTACAGATGATGCAGAAGTCCCTGAGATTTCTATGTGGGAATCAATGATATGGCTGGCAATCTTAACTGGAGGTATATCTGTCTTGTCAGGATACTTGGTTAAAACCATAGAGGGGGCATCAAAAGAGTTGAAAATGCCTGTGGCATTTCTTAGTGTTATTCTTCTCCCCATAGTTGGGAATGCTGCAGAACATGCTGGATCTGTAATGTTTGCTGTCAAAGACAAACTTGACTTATCTCTTGAAGTGGCTGTAGGATCTTCAATACAAATATCAATGTTTTTGATTCCTTTTTGTGTGGTTGTTGGATGGATGATTGACTGCCCTATGGACTTGAACTTTCAACCTTTCGAGACTACTACACTCTTCATGTCTGTTATCATTGTTGCGTTCTTGTTGCATAATGGAACCTCGAACTACTTCAAAGGAATAATGCTCATTCTTTGCTATTTGATAGTTTCTGCAAGTTTTTATGTGCATACTGACCCAGCACCAATTGGTGAAATTAATCCATTGACCGCTCATCCGTAG 1332 0.3881 MKRAISMECLEGRSVVELENASLLGPSSFQRKSLSFAEVSPIDHDCEKFSQDVVRSKVLSSIKVVVLSTKINLLMPFGPMAILVHNLFDSHGLVFLFCLLGIIPLAERLGYTTEQLALFTGPAVGGLLYATFGNATELIISIHALKSGFIHLVQQSLLGSILSNLLLVLGCALFAGGVVFYKREQSFNHADTSVDFGLLLMAVMGLIFPAVLHATHTELENEKSQLNLSRFTSCILLVAYVCYIVFQVKSQKNLPALVEEDGGLNKETTDDAEVPEISMWESMIWLAILTGGISVLSGYLVKTIEGASKELKMPVAFLSVILLPIVGNAAEHAGSVMFAVKDKLDLSLEVAVGSSIQISMFLIPFCVVVGWMIDCPMDLNFQPFETTTLFMSVIIVAFLLHNGTSNYFKGIMLILCYLIVSASFYVHTDPAPIGEINPLTAHP* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0148 443 Gene3D - 122 268 IPR044880 -
Lan9g0148 443 Gene3D - 270 426 IPR044880 -
Lan9g0148 443 TIGRFAM cax: calcium/proton exchanger 75 425 IPR004798 GO:0006816|GO:0015369
Lan9g0148 443 Pfam Sodium/calcium exchanger protein 283 421 IPR004837 GO:0016021|GO:0055085
Lan9g0148 443 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016021|GO:0055085
Lan9g0148 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 436 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lan9g0148 443 TIGRFAM caca2: calcium/proton exchanger 58 424 - -
Lan9g0148 443 PANTHER VACUOLAR CATION/PROTON EXCHANGER 6 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0148 Lan-Chr9 1685432 1694622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0148 15 430 Antiporters AT1G55730 62.440 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0148 K07300 - jre:109000743 543.888