Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0141 | ATGTCCACTCCCAACGCCGATTCCGCCACGGCGGCCTCCCCGCCCTCCCGTCCCTCGATTATTCTCCCTCCTCGCCCCTCCGCCGAGTCCTTCTTTTCCGGCGGCGGCGTCAGCCCCGGCCCCATGACCCTAGTCTCAAATTTCTTCTCCAACGAGGGCTACTCCGACACCGACTACCGCTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCACTCGCGTTCGGAGCAGCTCGGACCCCTTTCGGCGTCCCCACCGACAATTCCGGCGAAGAAGACGGTGGGGTCCACAAGAATTTGGGGTTCAAGCAGAGTAGACCCATGAATTTGATAATTGCTCGTTCTCCAATGTTCACAATCCCACCCGGGTTGAGCCCTTCTGGGTTTCTCAACTCGCCTGCCTTCTTTTCGCCACAGAGCCCCTTTGGAATGTCCCACCAACAGGCATTAGCACAGGTTACAGCTCAAGCTGTCTTCGCACAATCTCATATGCATATGCACGCAGATTATCAGTCGTCTGCTGCAATAACTGCTTCCACTGAACCATTGGTAGAGCAGCCATCTGTATCAGAACCTATAAATGCTCAACCAGGAACATCACAGCTTACTCAAGCTGATAAGAAAAATCAACCATCGTCCGTGCCCATTGACAAACCTGCAGATGATGGCTACAACTGGCGCAAGTACGGGCAGAAGCATGTTAAGGGGAGTGAGCATCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCTGTGAAGAAAAAAGTTGAGCGTGCACCTGATGGCCACATAAATGAAATCATCTATAAATGCCAGCATAACCATGAAAAGCCTCAGGGAAATAGGCGTATAAAAGATAATAGTGATACAAATGGAAATGCAAGTGTTCAACCTAATATTGATTCAAACTCTCAAGGTTGGGTAGGAAGTTCAACCAAGTTTGAAGAAAGTAAGGTCGATTGTTCAGTGCTTCAAAGTGACCAGACCTCCAACCAGGGGGCTTCCAGGCAACGACCTGGATCAACTGAGAGTGAGGAAGTGGGTGATGTAGAAAATAGGGAAGTGGGTGATGATAGGGAGCCAAACCCTAAGAGAAGGAACACTGATCTCACTGTTTCTGAAGCACCTCTTTCTCAGAAGAATGCCACAGAGGCCAAAATCATTGTACAAACAAGAAGTGAAGTTGATCTTTTGGACGATGGCTACAGGTGGCGAAAGTATGGTCAGAAGGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACAAGTGCAGGGTGCAACGTGCGTAAACATGTCGAGCGAGCTTCAACTGACCCCAAAGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTGCCTGCTGCTAGAAACAGCAGCCACTACACAAGCAGTAGCAATTCAATGCCATTAAAACCACATAATGTGGTGCCCGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGACTTAGTGACCAAAGACCGGTACATTTACGCTTAAAAGAAGAGGAAATAATAGTATAA | 1545 | 0.4841 | MSTPNADSATAASPPSRPSIILPPRPSAESFFSGGGVSPGPMTLVSNFFSNEGYSDTDYRSFSQLLAGAMASPLAFGAARTPFGVPTDNSGEEDGGVHKNLGFKQSRPMNLIIARSPMFTIPPGLSPSGFLNSPAFFSPQSPFGMSHQQALAQVTAQAVFAQSHMHMHADYQSSAAITASTEPLVEQPSVSEPINAQPGTSQLTQADKKNQPSSVPIDKPADDGYNWRKYGQKHVKGSEHPRSYYKCTHLNCPVKKKVERAPDGHINEIIYKCQHNHEKPQGNRRIKDNSDTNGNASVQPNIDSNSQGWVGSSTKFEESKVDCSVLQSDQTSNQGASRQRPGSTESEEVGDVENREVGDDREPNPKRRNTDLTVSEAPLSQKNATEAKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHYTSSSNSMPLKPHNVVPEKHPLLKDMDFGLSDQRPVHLRLKEEEIIV* | 515 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 456 | 478 | - | - | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 344 | 369 | - | - | |
Lan9g0141 | 514 | SUPERFAMILY | WRKY DNA-binding domain | 220 | 280 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | SMART | WRKY_cls | 400 | 459 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | SMART | WRKY_cls | 221 | 279 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | ProSiteProfiles | WRKY domain profile. | 395 | 460 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Lan9g0141 | 514 | Gene3D | WRKY domain | 384 | 461 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | Gene3D | WRKY domain | 211 | 281 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 462 | 478 | - | - | |
Lan9g0141 | 514 | Pfam | WRKY DNA -binding domain | 401 | 457 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | Pfam | WRKY DNA -binding domain | 222 | 278 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | ProSiteProfiles | WRKY domain profile. | 222 | 280 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 180 | 239 | - | - | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 287 | 343 | - | - | |
Lan9g0141 | 514 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 12 | 513 | IPR044810 | GO:0003700 | |
Lan9g0141 | 514 | SUPERFAMILY | WRKY DNA-binding domain | 392 | 460 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 180 | 212 | - | - | |
Lan9g0141 | 514 | PANTHER | WRKY PROTEIN | 12 | 513 | - | - | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 274 | 380 | - | - | |
Lan9g0141 | 514 | MobiDBLite | consensus disorder prediction | 222 | 239 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0141 | Lan-Chr9 | 1621475 | 1631270 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0141 | 16 | 512 | WRKY Transcription Factor Family | AT2G03340 | 50.933 | 7.24e-141 | 414 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lan9g0141 | WRKY | 1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0141 | - | - | aip:107635357 | 770 |