Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0140 ATGGCAGAATGCATTTTCACCGTGTCACAGAACGGAGGCGGAGATTTCCAAACGGTGCAGGAAGCAATCGACGCCGTGCCTCTCGGCAACACTAGCCGGACGGTGATCCGTTTGTCGCCGGGAATATACCGGCAGCCGGTGTACGTTCCAAAGACCAAGAATTTCATCACTCTTGCTGGTCTGCGCCCTGAGGATACTGTTCTTACTTGGAATAACACCGCTGCTGGAATCGATCATCATCAACCTGCCAAGGTGATAGGGACTGGGACATTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCAGAGAATATTACTTTTGAGAACTCTTCACCTGAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTAACAGCTGATCGATGCGCCTTCTATAATTGCAGGTTCCTTGGGTGGCAGGACACATTGTACTTACATTATGGCAAACAATATTTGAAAGATTGCTATATTGAAGGAAGTGTGGATTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCACATCCACTGCAAATCTGCTGGTTTCGTAACCGCTCAGGGCCGAAAATCTTCACAGGAATCAACTGGTTATGTATTCTTGAGATGCGTTATCACGGGTAATGGAGAAAATTCATATGCACATCTTGGACGACCGTGGGGACCTTTTGGAAGAGTGGTCTATGCATACACATATATGGATCCATGTATAAAACATGATGGATGGGATAACTGGGGGAACACAGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCGGGTTGCTGTCCGTCGAAACGAGTAGCATGGTGTAGAGAATTGATGGATGAAGAGACAGACCAGTTCCTGATGCATCCTTTTATTGACCCAGAACCTGATAGACCTTGGCTTGCTCAAAGAATGGCTTTGAGGATTCCATTTTCTGCATAA 951 0.4616 MAECIFTVSQNGGGDFQTVQEAIDAVPLGNTSRTVIRLSPGIYRQPVYVPKTKNFITLAGLRPEDTVLTWNNTAAGIDHHQPAKVIGTGTFGCGSTIVEGEDFIAENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFVTAQGRKSSQESTGYVFLRCVITGNGENSYAHLGRPWGPFGRVVYAYTYMDPCIKHDGWDNWGNTENERSACFYEYRCFGPGCCPSKRVAWCRELMDEETDQFLMHPFIDPEPDRPWLAQRMALRIPFSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0140 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Lan9g0140 316 Gene3D - 3 309 IPR012334 -
Lan9g0140 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Lan9g0140 316 PANTHER PECTINESTERASE 1 315 - -
Lan9g0140 316 SUPERFAMILY Pectin lyase-like 5 302 IPR011050 -
Lan9g0140 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0140 Lan-Chr9 1612601 1619394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0140 5 309 Carbohydrate Esterase AT5G47500 37.700 6.19e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0140 K01051 - gmx:100786786 616.305