Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0130 ATGGAAGGGACAACCCAAAACATGGCCAGCTTCAATACTGATGAAACATGTGAGCTGCAGAATCCTAGAACCCATAACCAATCATTTTCTCTTTCATTTGCAAAATTTGCAGAGAATTACCCTCCTGGCTTTTCTAGAAAGGTATTTGCAGAGATTATAGGGACATATCTATTGGTGTTTGTGGGAAGTGGTTCTGCTGCTCTGAATGCTATTGATGAAAGCAAAGTTTCAAGACTTGCAGCTTCACTTGCAGGAGGGTTTATTGTGACTGTGATGATTTATTCTATTGGTCACATCTCAGGGGCACACATGAACCCAGCTGTGTCCATAGCTTTTGCCTTTGTCACACATTTTCCATGGAGACAGGTCCCATTTTACATTGCAGCACAACTCACAGGAGCTATTTCTGCATCATATACGCTTAGAGAGCTTTTAGAACCAGCGAGACACCTTGGAGCAACATCACCTTCCGGATCAAACATTCAAGCATTGATCATGGAAACTGTGGCTACGTTCACCATGGTGTTCATTTCCACTGCCATGGCCTATGACACAAAAGCTATAGGAGAGCTAGCCGGAGTTGCAGTAGGTTCTTCCGTGTGCATAGCGAGCATCGTAGCTGGACCAATATCAGGAGGATCAATGAATCCAGCTAGGACACTAGCTCCTGCAATTGCCACTGCATCCTACAAAGGAATTTGGGTGTATCTGGTTGGACCAGTTACTGGGGCAATTTTAGGGGCATGGAGTTACAGTGTAATTCAGGAATCAGATAAACCAGCTTCTGCAATCTCGCTATCTTCCCTTTCATTCAAGCTACGCCGCCGCCCGATGATCATCGAAACTGAGCAAGTTGGTAACAACTGCCACCTCAGTTCATTGTGA 885 0.4486 MEGTTQNMASFNTDETCELQNPRTHNQSFSLSFAKFAENYPPGFSRKVFAEIIGTYLLVFVGSGSAALNAIDESKVSRLAASLAGGFIVTVMIYSIGHISGAHMNPAVSIAFAFVTHFPWRQVPFYIAAQLTGAISASYTLRELLEPARHLGATSPSGSNIQALIMETVATFTMVFISTAMAYDTKAIGELAGVAVGSSVCIASIVAGPISGGSMNPARTLAPAIATASYKGIWVYLVGPVTGAILGAWSYSVIQESDKPASAISLSSLSFKLRRRPMIIETEQVGNNCHLSSL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0130 294 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PANTHER AQUAPORIN NIP2-1 10 269 IPR034294 -
Lan9g0130 294 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 10 269 - -
Lan9g0130 294 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Lan9g0130 294 Gene3D Glycerol uptake facilitator protein. 4 262 IPR023271 -
Lan9g0130 294 CDD MIP 46 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan9g0130 294 SUPERFAMILY Aquaporin-like 39 258 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0130 Lan-Chr9 1522725 1526333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0130 45 268 Major Intrinsic Protein MIP AT5G37820 46.903 1.72e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0130 K09874 - cit:102612686 365.54