Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0129 ATGAACTACACCACTTTCCCTGATTTGCACCAAACCCAAACCCCACTTGTTAATTACACACTTTCTTCACCTTCATACCCTCACTACGTTTCTTACCCTCAAAACCCTAACCCTTCTTCTTCTGAACCCTCTCTTGGAACCCATGTTGGAACTGCTCCAGAACCTGGTCTGAACCCTCCAGGGGTGGATTCCTATACACCATTAACAACAACGAATTCAATTACCCATCTGGGTCATGAAGCTATTCCCAATTACTCTCTGGTTGGGTCTTCTGGGTACTATTTGGACCCTAATGCTCACAATTGGGCTGCTAGTGAGGCTGTAAGTGTCATCACTACGCCATTAAGTGTCTCAGAACAATTGGCTGCTGCATATCTGAACCCTGCATGGTGGATCAACCCCACAACTCAACCTCGCGGAAATGAAACATGGAAGAAATACCCGAAAAAAGTTAAAACTACCATTGTACAACCTGCATATTGTGAAGTTTGCAAGATAGAATGCACCAGTGTGGAAGTACTGCACCAACATAAATTGGGAAAGAAGCACAAGAAAAACTTGGAGACACTAAGAGAATCATTGAAACCATTTCAGAGTCATCCATCTGGTTCCTCTAATCCTTTTATCGGGCCGCAAGTACAGAACGACACGAGCAAATCTGCGAGTGGGAGTAAGAGTAAGAGGAAAACAGTCGAAACTCCAGAGGATTTGGAGAAAAAGAAAAGGAAGGTTCTTGAAGGTGGGGCAGCTGCTGAAGCTGTTAGAATATGTGCTGTATGTAATGTGGTGTGTAATAGTGCCATAGTTTATGATTATCATCTTAAAGGACAAAAGCATGCTGCTATGATGAAGAAAGTATCTGAACATACATAA 873 0.4284 MNYTTFPDLHQTQTPLVNYTLSSPSYPHYVSYPQNPNPSSSEPSLGTHVGTAPEPGLNPPGVDSYTPLTTTNSITHLGHEAIPNYSLVGSSGYYLDPNAHNWAASEAVSVITTPLSVSEQLAAAYLNPAWWINPTTQPRGNETWKKYPKKVKTTIVQPAYCEVCKIECTSVEVLHQHKLGKKHKKNLETLRESLKPFQSHPSGSSNPFIGPQVQNDTSKSASGSKSKRKTVETPEDLEKKKRKVLEGGAAAEAVRICAVCNVVCNSAIVYDYHLKGQKHAAMMKKVSEHT* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0129 290 MobiDBLite consensus disorder prediction 195 237 - -
Lan9g0129 290 SMART ZnF_U1_5 156 190 IPR003604 GO:0003676|GO:0008270
Lan9g0129 290 SMART ZnF_U1_5 252 286 IPR003604 GO:0003676|GO:0008270
Lan9g0129 290 Pfam Zinc-finger of C2H2 type 257 279 - -
Lan9g0129 290 PANTHER ZINC FINGER RNA-BINDING PROTEIN 17 287 - -
Lan9g0129 290 SUPERFAMILY beta-beta-alpha zinc fingers 152 190 IPR036236 -
Lan9g0129 290 SUPERFAMILY beta-beta-alpha zinc fingers 253 286 IPR036236 -
Lan9g0129 290 MobiDBLite consensus disorder prediction 29 47 - -
Lan9g0129 290 MobiDBLite consensus disorder prediction 195 221 - -
Lan9g0129 290 Pfam Zinc-finger double-stranded RNA-binding 160 184 IPR022755 -
Lan9g0129 290 MobiDBLite consensus disorder prediction 29 60 - -
Lan9g0129 290 MobiDBLite consensus disorder prediction 222 237 - -
Lan9g0129 290 Gene3D Classic Zinc Finger 224 286 - -
Lan9g0129 290 Gene3D Classic Zinc Finger 141 189 - -
Lan9g0129 290 PANTHER - 17 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0129 Lan-Chr9 1519834 1521964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0129 152 283 C2H2 Transcription Factor Family AT5G61190 35.606 4.34e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0129 - - gmx:100803425 281.567