Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0116 ATGGCCCAGTCCTTCAATCAAACCGAGATTAATTGGGATAAGCTAGATAAAACTAAGTTCTATGTCGTAGGAGCTGGGCTTTTTACAGGTATTACGGTGGCCCTTTACCCGGTTTCTGTCGTGAAAACTAGGTTGCAGGTTGGGACAAGGGATACCGTAGAGAGAAGTGCATTGTCTATTGCAAGAGGGTTACTTAGAACAGACGGTGTCCCTGGTTTATATAAAGGGTTTGGCACAGTTATCACAGGTGCAATTCCTGCCAGAATTATATTCCTCTCTGCCTTAGAGACCACAAAGGCAGCTACCTTCAAAGTGCTTGAACCATTCAGATTATCTGAAACTACCAATGCTGCCTTAGCAAATGGATTTGCAGGGATGACATCTTCGCTTTTTGCGCAATCCGTGTTTGTTCCAATCGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCTGGACATGCCCAGTATAGCGGGGGTCTAGATGTTGCTCGTAAGATTTTAAAGTCTGATGGAATCCGGGGATTTTATCGAGGGTTTGGTCTATCTGTTGTTACTTATTCACCTTCTAGCGCTGTATGGTGGGCCAGTTATGGTTCAAGCCAACGCATCATTTGGAGATTCTTGGGGCATGGTGCTGAATATGATAAAGGCACTCCTAGCCTGCCGGAGATTTTGTTTGTTCAAGGTGCTGGAGGTATTATTGCTGGTGCAAGTTCATCCTGCGTTACAACCCCACTAGATACCATTAAGACAAGATTACAGGTGATGAGTCATGAAAAGGGCACTGTAAAACAAGTTGTTAAAGATTTAATCAATGAAGATGGATGGAAAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATTTCAGCTTGGGGTACTTCAATGATATTGACATATGAGTATCTGAAACGCTTATGTGCAATAGATGAATAG 942 0.4289 MAQSFNQTEINWDKLDKTKFYVVGAGLFTGITVALYPVSVVKTRLQVGTRDTVERSALSIARGLLRTDGVPGLYKGFGTVITGAIPARIIFLSALETTKAATFKVLEPFRLSETTNAALANGFAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKILKSDGIRGFYRGFGLSVVTYSPSSAVWWASYGSSQRIIWRFLGHGAEYDKGTPSLPEILFVQGAGGIIAGASSSCVTTPLDTIKTRLQVMSHEKGTVKQVVKDLINEDGWKGFYRGFGPRFFSISAWGTSMILTYEYLKRLCAIDE* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0116 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Lan9g0116 313 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lan9g0116 313 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Lan9g0116 313 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Lan9g0116 313 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 313 - -
Lan9g0116 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Lan9g0116 313 SUPERFAMILY Mitochondrial carrier 13 305 IPR023395 -
Lan9g0116 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 308 IPR018108 -
Lan9g0116 313 Gene3D Mitochondrial carrier domain 21 312 IPR023395 -
Lan9g0116 313 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 313 - -
Lan9g0116 313 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Lan9g0116 313 Pfam Mitochondrial carrier protein 229 309 IPR018108 -
Lan9g0116 313 Pfam Mitochondrial carrier protein 25 102 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0116 Lan-Chr9 1398709 1405836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0116 10 313 Chloroplast and Mitochondria Gene Families AT5G15640 72.964 7.12e-168 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0116 K15121 - gmx:100782750 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0928 8 11007033 11011979 Lan9g0116 9 1398709 1405836 PCT
Lan9g0116 9 1398709 1405836 Lan8g0928 8 11007033 11011979 PCT