Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0114 ATGGGCATCTTTTTTATACCCAAAGCAAATTCTTGCATTTTGTTCTTGTTTCTTCTATCTTGTACTTGCTTCATTTCAACAGATGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGTTATGTTGCTGTTGTTACGATGAACAACTTCCAACAATATCGTCATATAGCGTCGCCCGGCTGGTCATTAGGATGGACATGGGCAAAGAAGGAGGTAATTTGGAGTATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAGTTTAAGGGAACCCCTCCACATTGTTGTAAAAAGGATCCAACAGTTGTGGATTTACTTCCGGGAACACCTTACAATATGCAAATCGCCAATTGCTGCAAAGGCGGGGTACTCAGTTCGTTTGCACAGGATCCAGCGAATTCAGTTTCATCATTTCAAGTTAGTGTTGGTAGAGCTGGAACTACAAACAAAACTGTCAAAGTACCGAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACTTGTAGTCCTGCGAAAATTGTGAAACCGACTCTATTCATTCAAGCAGACAAAAGGAGAGTAACTCAAGCACTCATGACTTGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCAACTTGCTGTGTTTCCCTCTCGTCATTCTATAACGATACTATCGTACCATGCCCGACATGCGCATGCGGCTGCCAGGGAAACTCATCTCAGACAGGGGCATGTGTGAATGGAAATACGCCGCATTTGGCATCGGTTGTTTCTGGACAGCATAATTTTGCACCTTTGGTCCAATGTACTAGTCATATGTGCCCTGTCAGAATCCACTGGCATGTTAAGCTTAATTACAAGGAGTACTGGCGCGTGAAGGTCACTATTACTAATTTTAACTATCGGATGAATTTTTCGGACTGGAACATGGTTGTTCAACACCCAAACTTAGACAATGTGACTCAACTATTCAGTTTCAACTACAAGTCATTAACTCCTTATGGAACAATAAATGATACAGCAATGCTTTGGGGATTTAAGTTCTACAACGATTTTCTTAATCAAGCCGGTCCTGATGGTAATGTACAATCCGAGATACTTTTCAGAAAGGATAAATCAACTTTTACTTTTGACAAGGGTTGGGCTTTTCCTAGAAGAATCTATTTTAATGGTGACAATTGTGTGATGCCACCACCTGATGCTTATCCATGGCTACCTAACGCCGGTTCTCAGCAACAGGCTTCTCTGCTTGCTTTAGTGATGTCTTCTTTGGTAGCCTTAGTATTTTATGCATATGTTTAA 1341 0.4124 MGIFFIPKANSCILFLFLLSCTCFISTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGTPPHCCKKDPTVVDLLPGTPYNMQIANCCKGGVLSSFAQDPANSVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCSPAKIVKPTLFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQGNSSQTGACVNGNTPHLASVVSGQHNFAPLVQCTSHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNFSDWNMVVQHPNLDNVTQLFSFNYKSLTPYGTINDTAMLWGFKFYNDFLNQAGPDGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSQQQASLLALVMSSLVALVFYAYV* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0114 446 PANTHER COBRA-LIKE PROTEIN 5 445 - -
Lan9g0114 446 PANTHER PROTEIN COBRA 5 445 IPR006918 GO:0010215|GO:0031225
Lan9g0114 446 PIRSF COBRA 3 446 IPR006918 GO:0010215|GO:0031225
Lan9g0114 446 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0114 Lan-Chr9 1367996 1372147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0114 13 444 COBRA Gene Family AT3G02210 74.023 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0114 - - gmx:100783820 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0935 8 11096805 11100909 Lan9g0114 9 1367996 1372147 PCT
Lan20g1329 20 19913624 19916762 Lan9g0114 9 1367996 1372147 PCT
Lan9g0114 9 1367996 1372147 Lan8g0934 8 11093995 11096510 PCT
Lan9g0114 9 1367996 1372147 Lan20g1328 20 19906044 19909980 PCT