Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0113 ATGAAGCTTTTCATATTAGCTTTGTGTGTTATTGTCATATTCTCTTATGCATGTGAGATAAAAGTTACACTCTTTTGCTCATTTAGTTTCACTTTAACTTGCATTGTTTTTTTTTATATTTTTAATATTGTTTTGTTCTTTCTGGTTGTAGCTGCTTATGATCCTTTGGATCCAAATGGTAACATAACTATCAAATGGGATGTTGTGTCTTGGACAGCAGATGGATATGTGGCAGTGGTAACAATAAACAACTTCCAAATATTTAGACACATCATGAATCCTGGTTGGACATTGGGTTGGTCATGGGCTAAGAAAGAAGTTATATGGTCTATGGTTGGAGCACAAACCACAGAACAAGGAGATTGCTCTAAGTTCAAAGGGAATGTGCCTCATTGCTGCAAGAAAACTCCAATAGTTGTGGACTTACTCCCTGGGGTACCCTACAACCAACAATTCTCAAATTGTTGTAAGGGTGGAGTTGTTGCAGCATGGGGCCAAGACCCTTCAGCAGCAATATCATCATTCCAAGTTAGTATTGGACAAGCTGGTACCTCAAACAAGACAGTTAAACTTCCAATGAACTTCAGTCTCTTGGCTCCAGGACCAGGCTATACTTGTGGCCCTGCTAAGATTGTTCCGTCGACTGTTTTCCTTACGGCTGATAAACGCCGCAAGACTCAAGCGCTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTCGGAAAAACCCAAGTTGCTGTGTATCGATGTCGTCCTTCTATAATGAAACGATTACCCCTTGTCCTTCATGTGCCTGTGGCTGCCATAACAAGAAGAGTTGTATCATGAGTGACTCTAAATTTCTCAGCATGAAGGGTATCCATACTCCAAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCATATGTGCCCAATCAGGGTACACTGGCATGTGAAGCAAAACTACAATGACTATTGGCGAGTGAAGATCGCCGTAACGAATTTCAATTACAAGATGAATTACTCCCTCTGGACACTTGCTGTTCAGCATCCAAATCTTAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCTATCCTTCCCTATGAATCCATAAATGATACAGGTATGTTCTATGGCATGAAATATTTCAATGATCTATTAATGGAAGCTGGACCATCTGGTAATGTTCAATCAGAACTACTTCTTCGAAAAGATAAGGATACATTCACATTCAAGCAAGGATGGGCGTATCCTCGAAAAGTCTACTTTAACGGCGAAGAATGCATGCTACCACCACCAGATACATACCCTTTCCTCCCGAACTCTGCCCCGAAAAACCTACTTAACTTTACCCCGGCATTCATTTTCTCATTGCTTGCCTTGCTAGCAGTTATGTGA 1398 0.4084 MKLFILALCVIVIFSYACEIKVTLFCSFSFTLTCIVFFYIFNIVLFFLVVAAYDPLDPNGNITIKWDVVSWTADGYVAVVTINNFQIFRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPIVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAISSFQVSIGQAGTSNKTVKLPMNFSLLAPGPGYTCGPAKIVPSTVFLTADKRRKTQALMTWNVTCTYSQFLARKNPSCCVSMSSFYNETITPCPSCACGCHNKKSCIMSDSKFLSMKGIHTPKKDNEPLLQCTHHMCPIRVHWHVKQNYNDYWRVKIAVTNFNYKMNYSLWTLAVQHPNLNNVTQVFSFDYKPILPYESINDTGMFYGMKYFNDLLMEAGPSGNVQSELLLRKDKDTFTFKQGWAYPRKVYFNGEECMLPPPDTYPFLPNSAPKNLLNFTPAFIFSLLALLAVM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0113 465 PIRSF COBRA 24 465 IPR006918 GO:0010215|GO:0031225
Lan9g0113 465 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lan9g0113 465 Pfam COBRA-like protein 76 239 IPR006918 GO:0010215|GO:0031225
Lan9g0113 465 PANTHER COBRA-LIKE PROTEIN 39 462 - -
Lan9g0113 465 PANTHER PROTEIN COBRA 39 462 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0113 Lan-Chr9 1364768 1367357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0113 24 465 COBRA Gene Family AT3G29810 63.677 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0113 - - gmx:100783410 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0113 9 1364768 1367357 Lan8g0935 8 11096805 11100909 PCT
Lan9g0113 9 1364768 1367357 Lan20g1329 20 19913624 19916762 PCT