Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0105 ATGACAATTGCAAATCTTGCACCTAAATCAGAGAAGAAAAGATCAAGGAAGAACAAAGCAATTGTTGATGAGAATGCACCCTTGTTGCCTAAAACTCATGAGAGTGATGTTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCTACCTTGAGAGAGTTGGGGATGGTGCCGGGTCTTATTGCAATTATCTTCATGGCTTTGTTGACCGAGAAGTCGATTGAGTTCTTGATTAGGTTCACCAGGGCAGGGAAGTCTTCTTCTTATGGAAGTTTGATGGGGGATTCCTTTGGGAAATATGGAAAAGCTCTGGTGCAATTATGTGTTATAGTTAATAACATCGGCGTTTTGATTGTTTACATGATTATAATTGGTGATGTGCTATCTGGAACCTCTGCAAGTGGAGAACATCATTCTGGTATCTTCGAAGGATGGTTTGGTGTGCACTGGTGGACGGGGCGGACATTTATTGTCCTTTTCACAACACTTGCTATATTTGCTCCTCTGTCAAGCTTTAAGCGAATCGATTCGTTGAGGTTCACATCTGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTTGTCATTGCTGTTGGAATCTCAATTATCAAGATTATAAGTGGAGGCATTGGGATGCCGAAACTATTTCCGGATGTTACTGATGTGGCATCAGTCTTAAAACTCTTTACCGTAGTCCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACACCATAGATAATGAACTTGAGGACTCCTCACAGATACAAGGGGTTGTACGAACTTCCCTTGGCCTATGCTCTTCAGTGTATATAATGATTAGCTTCTTTGGGTTCCTCCTATTTGGTGACGGAACTCTTGATGATGTACTTGCTAATTTTGATACCGATCTTGGAATCCCATTTGGTTCTGTGCTCAATGACGCTGTTCGTCTAAGTTATGCTGCGCATCTCATGCTTGTATTTCCAGTGGTATTCTATCCTTTGCGGCTGAACATAGATGGTCTTATCTTCTCTAAATCAAAGCCTTTGGTTCTGGATAACTTCAGATTTGGATCACTCACTGTTGCCCTCATTGGTGTTATCTTTCTCGGAGCAAATTTCATCCCTAGCATTTGGGATGCGTTCCAGTTCACCGGTGCAACTGCTGCAGTTTGTCTAGGATTCATATTTCCAGCTGCCATCGTTCTTAGGGACCGATACAACATAACAACTAAAGGAGACAAGATTCTGTCTGTGTTTATGATAGTCCTTGCAATCTTCGCAAACGCCGTTGCTATATACAGCGATGCATATGCCTTGTTGAAGCAGAATAAAACCTCCCGCGAATGA 1392 0.4224 MTIANLAPKSEKKRSRKNKAIVDENAPLLPKTHESDVGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMVPGLIAIIFMALLTEKSIEFLIRFTRAGKSSSYGSLMGDSFGKYGKALVQLCVIVNNIGVLIVYMIIIGDVLSGTSASGEHHSGIFEGWFGVHWWTGRTFIVLFTTLAIFAPLSSFKRIDSLRFTSALSVALAVVFLVIAVGISIIKIISGGIGMPKLFPDVTDVASVLKLFTVVPVFVTAYICHYNVHTIDNELEDSSQIQGVVRTSLGLCSSVYIMISFFGFLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLIFSKSKPLVLDNFRFGSLTVALIGVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAIVLRDRYNITTKGDKILSVFMIVLAIFANAVAIYSDAYALLKQNKTSRE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0105 463 PANTHER AMINO ACID TRANSPORTER 7 458 - -
Lan9g0105 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
Lan9g0105 463 MobiDBLite consensus disorder prediction 1 25 - -
Lan9g0105 463 Pfam Transmembrane amino acid transporter protein 45 442 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0105 Lan-Chr9 1270576 1273766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0105 3 463 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.547 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0105 K14207 - gmx:100796345 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0105 9 1270576 1273766 Lan2g0099 2 868474 872097 LSH
Lan9g0105 9 1270576 1273766 Lan8g0146 8 2480825 2484854 LSH
Lan8g0939 8 11122765 11126721 Lan9g0105 9 1270576 1273766 PCT
Lan9g0105 9 1270576 1273766 Lan8g0939 8 11122765 11126721 PCT