Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0095 ATGTCATCTTCTTCAACTACATTATCACTGGACCACCTCCCTCCTTCTGAACAGCTTTGTTATGTTCATTGCAACATTTGTGACACCGTCCTTGCTGTAAGTGTACCATGTACAAGCTTGTTCAAGACTGTGACTGTCCGATGCGGTCATTGCACCAACCTTCTGCCGGTGAACATGCGTGGATTGCTTCTACCTTCTTCCAATCAATTTCACTTGGGCCACTCTTACTTCTCTCCCTCTCATAACCTTCTGCAGGAGGAGATGCCAAACCCTACCCCAAATTATTTCATGAATCAGAATACAAACATAGCAAATGAGTTCTCTATGCCTGCTAGGACTACAGTTGATGAGCTTCCACGGCCACTGATCATTAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGAATCAAAGCTGTTAATCCTGATATAACCCACAGGGAAGCTTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATTCACTTTGGTCTCATGCCTACTGATCAGACAGTGAAGAAGACAAATGTGCACCAGCAACAGGATGGAGAAGAGGTTCTTATCAAAGAAGGCTTTTATGCTTCAGCTAATGTTGGGTTTTCACCCTACTAA 654 0.4511 MSSSSTTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSSNQFHLGHSYFSPSHNLLQEEMPNPTPNYFMNQNTNIANEFSMPARTTVDELPRPLIINRPPEKRQRVPSAYNRFIKDEIQRIKAVNPDITHREAFSAAAKNWAHFPHIHFGLMPTDQTVKKTNVHQQQDGEEVLIKEGFYASANVGFSPY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0095 217 PANTHER PROTEIN YABBY 4 1 214 - -
Lan9g0095 217 Pfam YABBY protein 15 179 IPR006780 GO:0007275
Lan9g0095 217 SUPERFAMILY HMG-box 125 172 IPR036910 -
Lan9g0095 217 Gene3D High mobility group box domain 124 175 IPR036910 -
Lan9g0095 217 PANTHER PROTEIN YABBY 6-RELATED 1 214 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0095 Lan-Chr9 820370 824760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0095 26 215 C2C2-YABBY Transcription Factor Family AT4G00180 58.095 8.41e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan9g0095 YABBY 1.3e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0095 K25796 - gmx:100798441 382.489