Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0091 ATGATTAAAAAACACATACTGGGAAAAGGCGGTTTCGGCAATGTGTACAAAGGAGTTCTCTCAGATGGCACTCTTGTAGCTGTCAAGAGGCTAAAAGACGGCAATGCTGCAGGAGGAGAGATACAATTTCAAACCGAAGTTGAAATGATCAGCCTCGCCGTTCATCGAAACCTTCTCAGATTGTATGGATTTTGTATGACACCAACAGAAAGACTTTTAGTTTACCCGTACATGTCTAACGGAAGCGTCGCTTCGCGTCTCAAGGGTAAGCCGGTCCTGGATTGGGGCACAAGGAAGCAAATTGCATTAGGAGCAGCAAGGGGACTACTTTATCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGATTATTGCGAAGCAGTTGTCGGAGATTTCGGATTAGCGAAACTATTGGATCATGAAGATTCACATGTAACAACTGCAGTAAGAGGCACTGTAGGGCATATTGCCCCGGAATATCTATCGACAGGACAATCATCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTCCTTGAATTGATAACAGGACAGAGGGCTTTAGAATTTGGAAAATCTGCTAACCAAAAAGGAGCTATGCTTGATTTGGTAAAGAAAATCCATTTGGAGAAGAAACTTGAATTGCTTGTTGACAAGGATCTGAAGAGCAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATATCTTCCGGGCCATAGACCGAAAATGTCCGAAGTGGTTCGAATGCTTGAAGGCGATGGACTAGCAGAGAGATGGGAAGCTTCTCAAAGAGCTTACACTACAAAATGCAAAGCAAATGAGTCCTCATTATCAGATAGATATTCTGATCTTACTGATGACTCTTTACTATTATTCCAAGACATGGAGCTTTCAGGACCAAGGTGA 966 0.4265 MIKKHILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAAGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAMLDLVKKIHLEKKLELLVDKDLKSNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRAYTTKCKANESSLSDRYSDLTDDSLLLFQDMELSGPR* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0091 321 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 321 - -
Lan9g0091 321 Pfam Protein kinase domain 3 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0091 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lan9g0091 321 Gene3D Phosphorylase Kinase; domain 1 2 77 - -
Lan9g0091 321 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0091 321 ProSitePatterns Protein kinases ATP-binding region signature. 7 29 IPR017441 GO:0005524
Lan9g0091 321 Gene3D Transferase(Phosphotransferase) domain 1 78 290 - -
Lan9g0091 321 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0091 321 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 3 321 - -
Lan9g0091 321 SUPERFAMILY Protein kinase-like (PK-like) 5 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0091 Lan-Chr9 729886 731226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0091 4 321 Receptor kinase-like Gene Family AT5G16000 84.568 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan9g0091 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0091 - - tcc:18602162 582.408