Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0090 ATGGAGAAGCAAAGAAAAGTAACTCTTGTTTGTTTTGTTTCATTTTTCTTGTTTTGGAGCTCTTCAAATGCATTGCTTTCTCCTAAAGGAGTAAACTTTGAAGTGCAAGCATTAATGGGCATAAAATATGGTCTAAAAGATCCACATGGTGTTTTAGACAATTGGGATGGAAATGCTGTTGATCCATGTAGTTGGACTGTGATCACTTGTTCTTCTGAAAACCTTGTCATTGGCTTGGGTATTCCTAGTCAAAGCTTATATGGCACTCTATCTTCAAGCATTGGCAACTTAACCAACCTTCAGATTGTGCTGCTACAGAATAATAACATAACTGGACCAATTCCTTCAGAGCTAGGAAAACTTTCTAAGCTTCAAACTCTTGATATCTCTAATAACTTCTTCAGTGGTGAAATTCCTTCCTCTCTTGGTCACCTGAGAAGCCTCCAATACATGAGGCTCAATAATAACAGTCTTGTTGGTGCATGCCCAGAGTCAGTGGCTAATATGACACAACTTGCTTTTCTTGACTTGTCCTACAACAATATTAGTGGCCCTGTACCAAGAATTCTGTCTAAATCATTCAACATTGTTGGAAACCCCCTTGTTTGTGCTACTGGAAAAGAACCAAACTGCCATGGATTGACACTAATGCCTATGTCCATGAACTTAACCAATCCTAAGGATGCTTTGCCATTAGGCGCAAAGAAAATTCACAAAACCGCGATCACCTTCGGCTTGAGCCTAGGATGTCTCTGCCTTATAGTTCTTGGTTTTGGACTTCTTATTTGGTGGAGGCATAAGCATAATCAACAAGCATTTTTTGATGTTAAAGACCGGCATCACGAAGAAATCTACCTCGGAAACTTGAAGAGGTTTCAATTCAGAGAACTCCAGATTGCTACTCACAACTTCAGCAGCAAACACATACTGGGAAAAGGCGGTTTCGGCAATGTGTACAAAGGAGTTCTCTCAGATGGCACTCTTGTAGCTGTCAAGAGGCTAAAAGACGGCAATGCTGCAGGAGGAGAGATACAATTTCAAACCGAAGTTGAAATGATCAGCCTCGCCGTTCATCGAAACCTTCTCAGATTGTATGGATTTTGTATGACACCAACAGAAAGACTTTTAGTTTACCCGTACATGTCTAACGGAAGCGTCGCTTCGCGTCTCAAGGGTAAGCCGGTCCTGGATTGGGGCACAAGGAAGCAAATTGCATTAGGAGCAGCAAGGGGACTACTTTATCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGATTATTGCGAAGCAGTTGTCGGAGATTTCGGATTAGCGAAACTATTGGATCATGAAGATTCACATGTAACAACTGCAGTAAGAGGCACTGTAGGGCATATTGCCCCGGAATATCTATCGACAGGACAATCATCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTCCTTGAATTGATAACAGGACAGAGGGCTTTAGAATTTGGAAAATCTGCTAACCAAAAAGGAGCTATGCTTGATTTGGTAAAGAAAATCCATTTGGAGAAGAAACTTGAATTGCTTGTTGACAAGGATCTGAAGAGCAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATATCTTCCGGGCCATAGACCGAAAATGTCCGAAGTGGTTCGAATGCTTGAAGGCGATGGACTAGCAGAGAGATGGGAAGCTTCTCAAAGAGCTTACACTACAAAATGCAAAGCAAATGAGTCCTCATTATCAGATAGATATTCTGATCTTACTGATGACTCTTTACTATTATTCCAAGACATGGAGCTTTCAGGACCAAGGTGA 1875 0.4139 MEKQRKVTLVCFVSFFLFWSSSNALLSPKGVNFEVQALMGIKYGLKDPHGVLDNWDGNAVDPCSWTVITCSSENLVIGLGIPSQSLYGTLSSSIGNLTNLQIVLLQNNNITGPIPSELGKLSKLQTLDISNNFFSGEIPSSLGHLRSLQYMRLNNNSLVGACPESVANMTQLAFLDLSYNNISGPVPRILSKSFNIVGNPLVCATGKEPNCHGLTLMPMSMNLTNPKDALPLGAKKIHKTAITFGLSLGCLCLIVLGFGLLIWWRHKHNQQAFFDVKDRHHEEIYLGNLKRFQFRELQIATHNFSSKHILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAAGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAMLDLVKKIHLEKKLELLVDKDLKSNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRAYTTKCKANESSLSDRYSDLTDDSLLLFQDMELSGPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0090 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 624 - -
Lan9g0090 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Lan9g0090 624 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Lan9g0090 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Lan9g0090 624 SUPERFAMILY L domain-like 34 197 - -
Lan9g0090 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 4 624 - -
Lan9g0090 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Lan9g0090 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Lan9g0090 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0090 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Lan9g0090 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Lan9g0090 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Lan9g0090 624 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0090 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0090 Lan-Chr9 720612 724102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0090 8 624 Receptor kinase-like Gene Family AT5G16000 76.160 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan9g0090 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0090 - - gmx:100798412 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0090 9 720612 724102 Lan8g0140 8 2341371 2345187 LSH
Lan20g1345 20 20144951 20149426 Lan9g0090 9 720612 724102 PCT
Lan9g0090 9 720612 724102 Lan20g1345 20 20144951 20149426 PCT