Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0080 ATGGCTTCAACTTCTCTTACTCCAAATTCTTCCCCTTCTTCTGCTTTATCTCCAATTGCTGTTTCATTACCACTTCCTATAACAAATTCTTCAACTTCACCATCTTCTCAGCCTAATCCCTCAGCTCCTTTTTCTCCTCCACCATCATCTACATCGCCGCAGCCGATTTCGCCACCTGTTTCTCAACCACCATTACCACCAGCTGCACCATCAGCCCCACCACAAGCAGTTATAACTGCCCCTCCTCCAGCTCAGACTTCACCACCCTTCCCAAATTTGTCCCCTCCTTCTCCAGCCAATGTGCCAAGGCCTCCATCCACCAATTCTCCTCCTCCCTCGAAGGAAAAGCCGCCGAAAACTAATCCTTCGCGAGCACCCCCTCCATCTGTTTCCCAATCCCATCCTTCCCCTGATGCCCCCCCTCCATCCACATTGCCATCAACGCCTTCGACCGATGCCCCCCCTCCATCCAAATTGCCATCAACGCCTTCGAACGATGCTCCCCCTCCATCCACATTGCCATCAATGCCTTCGAACGATGCCCCCCCTCCATCCACATTGCCATCAACGCCTTCGAACGATGCCCCCCCTCCATCCAAATTGCCATCAACGCCTTCGAACGATGCCCCCCCTCCATCCACATTGCCATCAACAACTCCTCCTTCAGTCTTGTCACCTCCGGCTTCTTTACCTCGCTCTGCACCTAATAAGACAGCAGCCGAGGGTCCGACTGTATCTCTACCCTCTATTCCAACTGAGGAACCCACTGCTAGACCAAATAATGGGAATGACACTGATGATGTATCCACAAAAACCACTTCTTCGCATTCGAGAGGGTTGAGTGACGGAGCCTCTGCGGCTGTTGCCATTACAGTTGGTTTTTGTGTTCTCGGCCTTCTTGTTATGGCTGTGTGGTTCGCAAAGAAAAAGAAGAAGAGAGGAAGAGGATCGAAAGATGGTTTCCCTACGGTTTCTCCATTTAACTCATCTCACAATTCAGGTACCTTATTGTTGAGATCACGGTCACCAGCTAACTTTGTAGGTAGGGCCTCTGGTAGTGATTTTCGTTATTCCCGACCAGATCCCAACGCAGTAGGTAGTTCAAGATCAGGGTTCACATATGAAGAACTTACTCAAGCTACGAACGGATTTTCAGCGCAAAATATGTTGGGAGAAGGTGGATTTGGTTGTGTGTACAAAGGTTTGCTCGTAGATGGAAGAGAAGTGGCTGTGAAACAACTCAAAATTGGTAGTGAGCAAGGAGAACGGGAGTTCAGCGCAGAAGTTGAGATTATTAGTCGTGTACACCATCGCCACCTAGTTTCCTTGGTGGGTTATTGTATATCCAAGCATCAAAGGTTGCTTGTCTACGATTATCTTCCGAATGATACTCTTCATTACCATCTTCATGGTGAAAACAGACCCGTTCTGGATTGGCCTACCAGAATCAAGGTTGCCGCTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCATCGAGACATTAAGTCATCAAACATCCTTCTTGATCAAAACTTTGAAGCTCAAGTTTCGGACTTCGGGCTCGCAAAATTAGCATTGGATACATATACACATGTAACAACACGCGTAATGGGAACCTTCGGGTACTTGGCACCAGAATATGCAACAAGTGGGAAATTGACTGAAAAGTCTGATGTATATTCTTTCGGCGTTGTGCTTTTAGAGCTAATTACTGGTCGGAAACCTGTAGACACCTCTCAGCCGATCGGTGATGAGAGTGTGGTTGAATGGGCTCGGCCTTTGTTGACCGAAGCACTTGAAAGTGAGGACTTTGAGATTTTGGTAGACTCAAGACTGGAAAAGAACTACAATAGAAATGAAATGTTACGGATGATTGAGGCTGCTGCAGCTTGTGTGCGTCACTCTGCAGTAAAAAGGCCGAAGATGAGCCAAGTAGTGAGAGCTTTAGATTCCTTAAATGAATTTCCTGATCTCAATAACGGAGTCAAACCCGGGCAGAGTAGGGTCTTCGATTCCACGCAGAAATCGGCACATGTGAGGATGTTTAGGAGGATGGCTTATGGTAGCCAAGATAGTTCCAATATGTTTGAGTCTCAGAGCAGCTGGTGGAGTAGAGAGCAAGAGGAAAACAAATCTAGGACTATCTCTTAA 2175 0.4745 MASTSLTPNSSPSSALSPIAVSLPLPITNSSTSPSSQPNPSAPFSPPPSSTSPQPISPPVSQPPLPPAAPSAPPQAVITAPPPAQTSPPFPNLSPPSPANVPRPPSTNSPPPSKEKPPKTNPSRAPPPSVSQSHPSPDAPPPSTLPSTPSTDAPPPSKLPSTPSNDAPPPSTLPSMPSNDAPPPSTLPSTPSNDAPPPSKLPSTPSNDAPPPSTLPSTTPPSVLSPPASLPRSAPNKTAAEGPTVSLPSIPTEEPTARPNNGNDTDDVSTKTTSSHSRGLSDGASAAVAITVGFCVLGLLVMAVWFAKKKKKRGRGSKDGFPTVSPFNSSHNSGTLLLRSRSPANFVGRASGSDFRYSRPDPNAVGSSRSGFTYEELTQATNGFSAQNMLGEGGFGCVYKGLLVDGREVAVKQLKIGSEQGEREFSAEVEIISRVHHRHLVSLVGYCISKHQRLLVYDYLPNDTLHYHLHGENRPVLDWPTRIKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDQNFEAQVSDFGLAKLALDTYTHVTTRVMGTFGYLAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPIGDESVVEWARPLLTEALESEDFEILVDSRLEKNYNRNEMLRMIEAAAACVRHSAVKRPKMSQVVRALDSLNEFPDLNNGVKPGQSRVFDSTQKSAHVRMFRRMAYGSQDSSNMFESQSSWWSREQEENKSRTIS* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0080 724 SUPERFAMILY Protein kinase-like (PK-like) 364 657 IPR011009 -
Lan9g0080 724 Gene3D Phosphorylase Kinase; domain 1 357 459 - -
Lan9g0080 724 ProSiteProfiles Protein kinase domain profile. 384 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0080 724 MobiDBLite consensus disorder prediction 700 724 - -
Lan9g0080 724 MobiDBLite consensus disorder prediction 313 334 - -
Lan9g0080 724 SMART serkin_6 384 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0080 724 MobiDBLite consensus disorder prediction 24 38 - -
Lan9g0080 724 Pfam Protein tyrosine and serine/threonine kinase 386 657 IPR001245 GO:0004672|GO:0006468
Lan9g0080 724 Gene3D Transferase(Phosphotransferase) domain 1 460 671 - -
Lan9g0080 724 MobiDBLite consensus disorder prediction 239 281 - -
Lan9g0080 724 MobiDBLite consensus disorder prediction 24 282 - -
Lan9g0080 724 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 104 707 - -
Lan9g0080 724 MobiDBLite consensus disorder prediction 39 228 - -
Lan9g0080 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Lan9g0080 724 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 104 707 - -
Lan9g0080 724 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0080 Lan-Chr9 619338 624116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0080 253 715 Trihelix Transcription Factor Family AT5G38560 64.706 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan9g0080 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0080 - - gmx:100784873 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0080 9 619338 624116 Lan8g0132 8 2154651 2159503 LSH