Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0077 ATGTTCCCTTCCACTACTTACAGCTCCACAAGCCCTTACCCTAACTACTTTCTTTCATCTTCTTCATCATACTATCCTTTCACTTTCCTTAACCCCGAAAATGCTTCTGCAAATAACAACATATTCCCTCATGATCCATCTTATGTTCCCTATAACATACCCTCTACTCATCATCATTTTTCAATGGTAGAAACACCTGCAAATTTTGAAGTTGCAGATAATTATGCTGCTGCAATGTTCAAAAATGATGCTAATGGTTACAATAACTTTGGCTTCTCTAATTTTCTCACCAAAAAACCTGCTGCAAAGAAAGACAGGCACAGCAAGATCCTCACATCTCAGGGTTTGAGGGACCGGAGGGTGAGATTGTCCATCAATATCGCGCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAAAACCCTTGAGTGGCTCTTCAACAAGTCCAAGAAAGCAATGAAGGATCTTGCTAGGAGCAACCATCACAGTAGCAATGGTTTTGCCAATAGCATCTCCTCTTCCTCTTCTTCAGATTCGGAGTGTGAAGTGGTTTCAATGATCAAACAAGATGCCACTAATCCACAAAGGGTAGTGGTGGATTCAAAAGAGAGGAAAGTGAAAAGGGCAAAGATGAAAGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAACAAGATGTGCAACACAAGTGTCATGAAAAAAAAGTGTCCTATAACTGATAACCCTCAAATGCTTCACCAATTGAGGTCACCCTTTCATCATCCTGAGGATTTGGCGAGATCGCCGGATAATAAGTTGATTCCATCTCATCATCATCACCATCACCATCACCCTAATCTTGAAGTTGCTAGAGATGACTTCAATGTTATTGAGGAGTCCATTGTGATCAAGAGAAAATTGAAGCAATCATTGTTATCTTCTTCTCATCATCACCAAAACCATGTGATCCCTAAGGAAGCAAGTTCCAACAACAACACTGAACACCATTCCTTTCCAATTTTATCTCCAAATTGGGATGCTAATAATGGTGCCACAAGCCGTACCAACTTTTGTGCAGGGCTTCAAATCTTTGGAAAGTCTGGGGAAGAGTGTACAAATCCCCATCTATAA 1137 0.409 MFPSTTYSSTSPYPNYFLSSSSSYYPFTFLNPENASANNNIFPHDPSYVPYNIPSTHHHFSMVETPANFEVADNYAAAMFKNDANGYNNFGFSNFLTKKPAAKKDRHSKILTSQGLRDRRVRLSINIARKFFDLQDMLGFDKASKTLEWLFNKSKKAMKDLARSNHHSSNGFANSISSSSSSDSECEVVSMIKQDATNPQRVVVDSKERKVKRAKMKESREKARARARERTSNKMCNTSVMKKKCPITDNPQMLHQLRSPFHHPEDLARSPDNKLIPSHHHHHHHHPNLEVARDDFNVIEESIVIKRKLKQSLLSSSHHHQNHVIPKEASSNNNTEHHSFPILSPNWDANNGATSRTNFCAGLQIFGKSGEECTNPHL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0077 378 MobiDBLite consensus disorder prediction 202 231 - -
Lan9g0077 378 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 19 377 - -
Lan9g0077 378 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 377 IPR005333 GO:0003700
Lan9g0077 378 MobiDBLite consensus disorder prediction 316 340 - -
Lan9g0077 378 MobiDBLite consensus disorder prediction 199 232 - -
Lan9g0077 378 ProSiteProfiles R domain profile. 217 234 IPR017888 -
Lan9g0077 378 Pfam TCP family transcription factor 102 237 IPR017887 -
Lan9g0077 378 ProSiteProfiles TCP domain profile. 103 161 IPR017887 -
Lan9g0077 378 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0077 Lan-Chr9 589341 590759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0077 99 236 TCP Transcription Factor Family AT1G67260 41.875 7.12e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan9g0077 TCP 8.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0077 - - gmx:100786452 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0077 9 589341 590759 Lan8g0130 8 2112169 2113857 LSH