Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0069 ATGACTCAGTCTGTGGAAGTGTTGAATCGTTATGGAACAGATCTGGTTGGAGAAGCAAGAGGTTCAGAAAGAGAGTGTATGGCAGGATTGGAGTGTTTTCTGAACGTAGTGAGAGCATTGGGAATGGGATCTTGTATAACAGAGGTTGGAGGAGGTAGTGGTTCACCACCACTTGTTCCACAGTTGAATAATTTGGATAGTGTAAAGAGAAGAAGAATGAAGGGTTCATCTTCTTTTGATTATAAAGTAGTTCCTGGGAGAATGTTCTTGAATGGATCCAGTGATGTTGCATCTTTGTATTCTAAGCAAGGTAAAAAGGGGATCAACCAAGATGCTATGCTAGTTTGGGAGAACTTTTGTTCAAAGGAGGGAACCATATTTTGTGGTGTTTTTGATGGTCATGGACCTTTTGGCCATAGGGTCGCGAAGAGAGTTAGGGATTCTTTCCCTTTAAAGCTTATTGCTCAATGGGATTTGCATCATAAGAATAAAGACGGACTCAGTGATCACAGCAGCGCTGCAGGAAGTTGTAATTCTGATATTGGATTTAGACTGGCTGATGAGAAACCTATTGTGACTGATAATGAGCTTGGTGGAACAAATGCTATATTAACACTAAGAGAATCTTTTTTGAAGGCTTCAAAGTTTATGGACAAAGAACTGAAACTGCACCCTGATATCGATTGCTTTTGCAGTGGAACTACAGCAGTTACCTTAGTCAAGCAGGGTCAGGACCTTGTTATTGGAAATGTTGGGGACTCAAGAGCTGTATTGGGTACCCGAGATCATAATGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCGTCACAGAGGAAGGGTCTTTTCCCTTCGGAATGAACCTGATGTTTCTCGAGTGTGGCTTCCTAACTCTGATTTCCCTGGTCTTGCCATGGCACGGGCTTTTGGAGATTTTTGCCTGAAGGACTATGGATTGATCGCTGTTCCGGATATCTCACATCATCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGATCTGGGATGTTTTATCCAATGAAGAAGTTGTGGACATTGTGGCATCTGCTTCTCAGACTAATGCAGCTCGAGTACTTGTTGAGTCAGCTGTAAAAGGATGGAAGACAAAATACCCTTTTTCTAAGATTGACGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCAAATTCCGAGCTCAAGTCAGCATATGCAACAGAGGAGTTGATACCAGAGGCATCAATTGACCAATCTGAGCAGTCACCTCTACTTTGTGAGAAGGGAATTGGTCTGGATGCTTAA 1347 0.4224 MTQSVEVLNRYGTDLVGEARGSERECMAGLECFLNVVRALGMGSCITEVGGGSGSPPLVPQLNNLDSVKRRRMKGSSSFDYKVVPGRMFLNGSSDVASLYSKQGKKGINQDAMLVWENFCSKEGTIFCGVFDGHGPFGHRVAKRVRDSFPLKLIAQWDLHHKNKDGLSDHSSAAGSCNSDIGFRLADEKPIVTDNELGGTNAILTLRESFLKASKFMDKELKLHPDIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDHNDSLIAVQLTIDLKPNLPREEERIKRHRGRVFSLRNEPDVSRVWLPNSDFPGLAMARAFGDFCLKDYGLIAVPDISHHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQTNAARVLVESAVKGWKTKYPFSKIDDCAAVCLFFDSNSELKSAYATEELIPEASIDQSEQSPLLCEKGIGLDA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0069 448 ProSiteProfiles PPM-type phosphatase domain profile. 96 409 IPR001932 -
Lan9g0069 448 CDD PP2Cc 96 409 IPR001932 -
Lan9g0069 448 PANTHER ALPHABET, ISOFORM E-RELATED 42 415 - -
Lan9g0069 448 SUPERFAMILY PP2C-like 96 411 IPR036457 -
Lan9g0069 448 Pfam Protein phosphatase 2C 205 387 IPR001932 -
Lan9g0069 448 Gene3D - 93 411 IPR036457 -
Lan9g0069 448 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 415 - -
Lan9g0069 448 SMART PP2C_4 85 407 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0069 Lan-Chr9 490274 495340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0069 80 413 PP2C-type Phosphatase Gene Family AT1G16220 59.941 3.01e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0069 - - gmx:100810538 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0069 9 490274 495340 Lan2g0078 2 702107 706404 LSH