Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0056 ATGCGCATGGAGATAACCTACGCCTCACAAAGTTACCCCAAACACTCCGGCGCCGCCGCTATGCCGTCGTCGACCACCACCACCTCACGCACCGTCAGGATCATCCCTCTGCAGCACCCGACGGCCACAACGTCTTCTTCTTCTTCTTCTTCTTCATCGTCATCACCGTTCCCGTTTTCACTGTGGCTCTTGAATCTCCGTCGAATGACATGGCTTGAATGGATTGAGTTCTTCTTCCCTTGCTGCCGTTGGATTCGAACGTATAAATGGAAAGAGTATTTTCAGGTCGATCTCATGGCTGGTATCACCGTTGGTGTTATGCTTGTTCCTCAGTCAATGTCATATGCAAAATTAGCGGGGCTTCAACCAATATATGGACTATACTCTGGTTTTGTGCCCATATTTGTTTATGCCATATTTGGGTCTTCTCGCCAGCTTGCTGTTGGCCCAGTAGCGTTGGTTTCTCTCTTGGTCTCTAATGTGCTAAGTGGCGTCGCTGATCCATCCACTGAATTATACACAGAGCTGGCAGTAATATTGGCTCTTATGGTTGGGATACTGGAGTGCATAATGGGACTTTTGAGGCTAGGATGGCTGATTCGTTTCATTAGTCATTCGGTGATCTCTGGCTTTACGACTGCTTCAGCCATTGTGATTGGTTTATCTCAAGTGAAATACTTCTTGGGGTATAATATTGACAAAAGTAGCAAGATCATACCACTGATAAAGAGCATAATTGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAGTCACGCTTGCGATATTGCTTGTCATGAAGCACCTGGGGAAATCGAGGAAACACTTGCGGTTCTTGAGAGCAGCCGGTCCTCTCACAGCAGTAGTTCTGGGAACAGTTTTTGTAAATATATTTCATCCATCATCAATTTCTTTGGTAGGAGATATACCTCAGGGCCTTCCTAAATTTTCTATCCCTAGAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACCGCTCTTCTCATAACTGGTGTCGCTATGTTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGTGTTTCCAATGTTCTCGGTTCATTCTTTTCAGCATATCCCACCACAGGATCCTTTTCAAGGTCAGCTGTCAACCATGAAAGTGGTGCAAGATCAGGAATATCTGGGATTGTTTCAGCAATTATAATGACCTGTGCACTTATGTTCTTAACTCCACTATTTGAGTATATACCTCAGTGTACTCTTGCTGCCATCGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGTGGCCAGTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGATTATTACCAGCACAACTACATTATTCCTTGGTATTGAGATTGGCGTAATTGTTGGGGTTTGCGCTTCTCTTGCCTTCGTCATTCACGAGTCAGCAAACCCACATATTGCTATTTTGGGTCGTTTGCCGGGAACAACTGTGTATAGAAATGTTAAACAGTATCCTGAAGCATATGCATACAATGGAATTGTAATTGTCCGTGTTGATGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGGGAATATGAAGTTACTGTTGATACTTCAACAAGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTTATTCTAGAGATGGCTCCCGTTACCTACATCGACTCTAGTGCTGTTCAAGCTTTGAAGGACTTGTATCAGGAATACAAATTAAGGGACATTCAGATTGCAATATCCAATCCAAGCCCAGAAGTTCTGCTTACCCTGTCTAAATCTGGTCTGGTTGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGTTTGCAGCATGTGCAAAGCTTGAAAGGTGGATCTAACATTTCACAACCATCACATGCTTTATCAGAAGACAAACCAAGTGTATATGGGCGATTACTGAAACAAACAGGGGAGAACCTTGCAATTTCAGATTTGGAGTCTGGTAATGGCAGGCCTCCACTTTCCATGGACAAAGATCCTCACTTGGAGCCATTGTTGTCCAAAGAACATTGA 2133 0.4332 MRMEITYASQSYPKHSGAAAMPSSTTTTSRTVRIIPLQHPTATTSSSSSSSSSSSPFPFSLWLLNLRRMTWLEWIEFFFPCCRWIRTYKWKEYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGVADPSTELYTELAVILALMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQVKYFLGYNIDKSSKIIPLIKSIIAGADKFSWPPFVMGSVTLAILLVMKHLGKSRKHLRFLRAAGPLTAVVLGTVFVNIFHPSSISLVGDIPQGLPKFSIPRAFEYAESLIPTALLITGVAMLESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGARSGISGIVSAIIMTCALMFLTPLFEYIPQCTLAAIVISAVIGLVDYDVASFLWRVDKKDFLLWIITSTTTLFLGIEIGVIVGVCASLAFVIHESANPHIAILGRLPGTTVYRNVKQYPEAYAYNGIVIVRVDAPIYFANTSYIKDRLREYEVTVDTSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKGGSNISQPSHALSEDKPSVYGRLLKQTGENLAISDLESGNGRPPLSMDKDPHLEPLLSKEH* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0056 710 MobiDBLite consensus disorder prediction 683 710 - -
Lan9g0056 710 CDD STAS_SulP_like_sulfate_transporter 518 634 - -
Lan9g0056 710 Pfam STAS domain 518 637 IPR002645 -
Lan9g0056 710 MobiDBLite consensus disorder prediction 696 710 - -
Lan9g0056 710 ProSiteProfiles STAS domain profile. 517 641 IPR002645 -
Lan9g0056 710 PANTHER SULFATE TRANSPORTER 49 659 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g0056 710 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Lan9g0056 710 SUPERFAMILY SpoIIaa-like 519 641 IPR036513 -
Lan9g0056 710 Pfam Sulfate permease family 94 467 IPR011547 GO:0016021
Lan9g0056 710 Gene3D STAS domain 497 645 IPR036513 -
Lan9g0056 710 PANTHER SULFATE TRANSPORTER 4.1-RELATED 49 659 - -
Lan9g0056 710 TIGRFAM sulP: sulfate permease 80 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0056 Lan-Chr9 396318 406363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0056 29 647 Inorganic Solute Cotransporters AT5G13550 74.557 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0056 K18059 - gmx:100794754 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0056 9 396318 406363 Lan8g0102 8 1693735 1706540 LSH