Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0053 ATGGGATCGAGGGGATTATTCGGGTGGTCCCCACCTCACATACAACCACTTACTCCGGTGTCGGAAGTATCGGAGCCGCCGGAATCTCCGTCGCCGTATCTGGACCCTAGCGCCGAGACCTCGGCTTCGCAGCAGGTTGAGGTCGAGGAGGAGATGGAGGAGCCTGAGGAGATTGAGCCACCACCGGCTGCTGTTCCTTTCTCCCAGCTCTTCGCCTGCGCCGACCGGTTCGATTGGTTCCTCATGTTCGTTGGCTCTGTCGCGGCCGCGGCTCATGGAACAGCTCTTGTTGTTTACTTGCACTATTTCGCGAAGATTATTCATGTGTTGAGGATGCATTCTCAGGAAGGAACTTCAGAGGAACAATTTGAGAGATTCAGTGAGCTTGCTTTAACCATTGTTTATATTGCTGCGGGAGTTTTTACTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACTGGGGAACGGCAGACTGCTGTCATCAGATCAGAATATGTTCAAGTATTACTAAACCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATAGTGAGTCAAGTCTTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCATCAGCGGTCTTGTCATTGGACTTGTCAATTGTTGGCAGATTGCATTGATAACGTTAGCTACAGGTCCATTCATTGTTGCTTCCGGAGGAATATCAAATATATTCCTCCACAGGCTTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCAAGTATTGCTGAACAGGCAGTTTCCTATATAAAGACATTGTATGCATTTACAAATGAAACATTGGCCAAGTATTCATATGCAACATCACTGCAAGCTACTCTCAGATATGGTATATTAATAAGTCTTGTTCAAGGACTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCACTACAACTCTGGGTTGGAAGGTTCTTGGTTATTCATGGAAAAGCACATGGCGGTGAAATTATAACAGCACTCTTTGCTGTAATCTTGAGTGGCTTGGGGTTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGCCGGTCATCCTCATCTGTTAATCATGATGGCACTGCCCTTGATTCTGTGCAAGGAAATATACAGTTTCGGAATGTTTATTTCAGTTATCCATCTCGTCCTGAAATCCCTATACTGAGTGAATTTTATCTCACTGTACCTGCTAAGAAAGCTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTCTATGATCCTACATTAGGTGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGTTGAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGAGATGCTACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCGTGCACATACATTTATCAGCTCGTTAGAGAAAGGTTATGACACGCAGGTTGGCAGGGCTGGTCTAGCCTTGAACGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACCGGTGGACTTGATTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTCTGGATCTGCTTATGTTGGGACGCTCAACTATAATAATTGCTCGAAGGCTTAGTTTCATAAGGAATGCAGATTACATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTATCCCGGGGTGGCTTATATGTAGAGCTTCTTCGAAGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTATTCGAAACTACAAGGGTACTGCAGCATTCCAAATTGAGAAGGATTCTTCAGCAAGTAATAGCCTCAAAGAGCCATCTTCCCCTAAAATGTTGAAGTCACCTTCTCTTCAAAGTAGGCCTAATGTATCTCGAGCTACAGGTGGTATCTTTAACTCGCAAGAATCATTAAAAGTGTTGAGCCCACCACCTGAGAAGATGATGGAAAATGGTCGGGCTGTGGATGATGCACATAAAGAGCCATCAATAAGAAGACAGGATAGTTTTGAAATGAGACTGCCAGAGTTACCCAAGATTGATGTTCAGTCTGTGCAACAACAAACATTAAATGATTCTGACCCAGAATCCCCGGTTTCACCTCTGTTGACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTCAGTAGATCACATAGTCATTCTGATGATGGTTCAGTTACTTTGAGAGAAGGAAAGGACACACGGCATCGAAAACCACCATCTATTCGGAAGCTAGTCGAGCTTAGTTTTGCTGAGTGGTTTTATGCTGTGTTAGGAAGCATTGGTGCTGCTGTCTTTGGCTCCTTCAATCCCCTTCTTGCTTATGTTATTGGCCTTGTGGTGACAGCTTACTATAGAATTGATGAAGATCATCACTTACAACACGAGGTTAACAAATGGTGCCTGATCATTGGTTTCATGGGGATTGTGACAGTTGTTGCCAACTTTTTGCAGCATTTCTACTTCGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGATGCTGAGGAAAATAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTCAGCAATCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTGTTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGATTAGCACTTGTGGCTTTTGCAACCATTCCAGTTCTCTGTTTGTCGGCCTTTGCCCAGAAATTATGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTCGAAGATGCTGTTAGAAACATTTACACCGTCGTTGCATTTTGTGCTGGTAATAAGGTGATGGAGCTCTATAGGCTGCAATTAAATAAAATATTTAAGCAAAGTTTTCTTCATGGAATGGCAATTGGTTTTGCATTTGGCTTTTCACAGTTTCTTCTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTATAAAAAATGGTTATATTGATCCACCTACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCATTTGGATTGGCTCCTTACATACTTAAACGCCGGAAATCTCTCATATCCGTGTTTGACATTATAGACCGTGTGCCTAAGATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTATACGGAAGCATCGAGTTAAAGAATGTTGATTTTTGTTACCCATCTCGTCCCGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTCAGTGGGGGACAAACAGTTGCTATTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATCATATCTTTAATCGAGAGATTTTACGATCCGGTTGCTGGTCAAGTTATACTTGATGGTCGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGTCATCTTGGTCTTATTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATAATATATGCAAGGCATAATGCCAATGAAACCGAGATGAAAGAAGCTGCAAGAATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTACGACACTCATGTCGGGATTAGAGGTGTTGACTTAACCCCGGGACAGAAACAGAGAATTGCAATTGCGAGGGTAGTGCTGAAAAATGCTCCAATCTTGTTGGTAGATGAAGCAAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTTGACACCCTAATAATGGGAAACAGGACCACTATTTTAATAGCGCATAGGGCTGCAATGATGAGGCACGTGGACAATATCGTAGTGCTTAATGGAGGACGGATAGTAGAGGAAGGGATTCATGATTCTCTTGCTGCAAAGAATGGTCTGTACGTCCAATTGATGCAACCTCATTTTGGTAAGGCCATGCGTCAGCATCATCGGCTTGTTTAG 4212 0.4257 MGSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPSAETSASQQVEVEEEMEEPEEIEPPPAAVPFSQLFACADRFDWFLMFVGSVAAAAHGTALVVYLHYFAKIIHVLRMHSQEGTSEEQFERFSELALTIVYIAAGVFTAGWIEVSCWILTGERQTAVIRSEYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGLVNCWQIALITLATGPFIVASGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIKTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTALDSVQGNIQFRNVYFSYPSRPEIPILSEFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIARAHTFISSLEKGYDTQVGRAGLALNEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSFIRNADYIAVMEEGQLVEMGTHDELLSRGGLYVELLRSEEAAKLPKRMPIRNYKGTAAFQIEKDSSASNSLKEPSSPKMLKSPSLQSRPNVSRATGGIFNSQESLKVLSPPPEKMMENGRAVDDAHKEPSIRRQDSFEMRLPELPKIDVQSVQQQTLNDSDPESPVSPLLTSDPKNERSHSQTFSRSHSHSDDGSVTLREGKDTRHRKPPSIRKLVELSFAEWFYAVLGSIGAAVFGSFNPLLAYVIGLVVTAYYRIDEDHHLQHEVNKWCLIIGFMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDAEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVVVGLLIGALLHWRLALVAFATIPVLCLSAFAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKNGYIDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVSGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVILDGRDLKLYNLRWLRSHLGLIQQEPIIFSTTIRENIIYARHNANETEMKEAARIANAHHFISSLPHGYDTHVGIRGVDLTPGQKQRIAIARVVLKNAPILLVDEASSSIESESSRVVQEALDTLIMGNRTTILIAHRAAMMRHVDNIVVLNGGRIVEEGIHDSLAAKNGLYVQLMQPHFGKAMRQHHRLV* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0053 1403 MobiDBLite consensus disorder prediction 1 62 - -
Lan9g0053 1403 CDD ABC_6TM_Pgp_ABCB1_D1_like 82 381 - -
Lan9g0053 1403 Gene3D ABC transporter type 1, transmembrane domain 801 1141 IPR036640 GO:0005524|GO:0016021
Lan9g0053 1403 SUPERFAMILY ABC transporter transmembrane region 70 381 IPR036640 GO:0005524|GO:0016021
Lan9g0053 1403 MobiDBLite consensus disorder prediction 754 781 - -
Lan9g0053 1403 Gene3D - 1143 1400 IPR027417 -
Lan9g0053 1403 Gene3D - 396 650 IPR027417 -
Lan9g0053 1403 SMART AAA_5 1180 1367 IPR003593 -
Lan9g0053 1403 SMART AAA_5 433 813 IPR003593 -
Lan9g0053 1403 MobiDBLite consensus disorder prediction 754 811 - -
Lan9g0053 1403 Coils Coil 252 272 - -
Lan9g0053 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 641 IPR003439 GO:0005524
Lan9g0053 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1142 1389 IPR027417 -
Lan9g0053 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0053 1403 MobiDBLite consensus disorder prediction 782 811 - -
Lan9g0053 1403 MobiDBLite consensus disorder prediction 667 735 - -
Lan9g0053 1403 MobiDBLite consensus disorder prediction 720 735 - -
Lan9g0053 1403 MobiDBLite consensus disorder prediction 667 710 - -
Lan9g0053 1403 Pfam ABC transporter transmembrane region 83 356 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0053 1403 Pfam ABC transporter transmembrane region 835 1099 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0053 1403 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1398 - -
Lan9g0053 1403 CDD ABC_6TM_Pgp_ABCB1_D2_like 825 1136 - -
Lan9g0053 1403 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Lan9g0053 1403 Pfam ABC transporter 427 571 IPR003439 GO:0005524
Lan9g0053 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 640 IPR027417 -
Lan9g0053 1403 Gene3D ABC transporter type 1, transmembrane domain 60 387 IPR036640 GO:0005524|GO:0016021
Lan9g0053 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 373 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0053 1403 SUPERFAMILY ABC transporter transmembrane region 812 1138 IPR036640 GO:0005524|GO:0016021
Lan9g0053 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Lan9g0053 1403 PANTHER ABC TRANSPORTER B FAMILY 19 1398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0053 Lan-Chr9 364589 373353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0053 52 696 Calmodulin-binding Proteins AT2G36910 44.615 8.05e-172 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0053 K05658 - gmx:100789116 2456.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0053 9 364589 373353 Lan2g0067 2 604971 614450 LSH