Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0005 ATGTCTCAGTCAGATTATTCCCCAGCTTTTAACAAGCCCAGATTGGTTCTCAAGAAGGTTTTAGCCAAATCTCAACATGAAGGGGTTGGAGCTGTTGTTAGAAGAGCCATTGGAAGAAGTGAGTTGAAGAACTTGGATCCCTTTATAATGTTGGATCACTTCTCAGTATCTCCTCCTGGAGGGTTTCCTGATCATCCACATAGAGGTTTTGAGACTGTCACCTACATGCTAGAGGGAGGCATTACTCACAAAGATTTTGCTGGGCACGAGGGTACTATAAGAACTGGTGATGTTCAGTGGATGACTGCAGGGAGAGGAATAATTCATTCTGAAATGCCTGCAGAAGCAACCAACAAGGGATTGCAACTTTGGATCAATTTATCAGCAAATAACAAAATGATTGAACCTAACTATCAAGAAGTTGTAAGTGAGAAGATTCCATCAGCAGAAGAAGATGGTGTTGAAGTGAGAGTAATAGCAGGAGAAGCAATGGGAATCCATTCACCTGTCTACACTACAACTCCAACCATGTTCCTTGATTTCTCAATGAAACCTGGATCTCAGTTTCATCAAATTATTCCAGAATCTTGGAACTCTTTTGTTTATGTAATTGAAGGAGAAGGAGTTTTTGGGTCTCCAAATTCATCACCAAATATGGCACACCATGTTCTAGTTTTGAGTAATGGTAATGGCCTTAGTATATGGAATAACTCTTCAAAGGGTTTAAGGTTTGTGTTGATTGGAGGACAACCAATTAATGAGCCAGTTGTTCAGTATGGACCTTTTGTGATGAATACACAACATGAGATAGACAAAACTATTGAAGATTATCACTATAGCAAAAATGGATTTGAGATGGGCAAATATTTCAAATCTCAATAG 882 0.3912 MSQSDYSPAFNKPRLVLKKVLAKSQHEGVGAVVRRAIGRSELKNLDPFIMLDHFSVSPPGGFPDHPHRGFETVTYMLEGGITHKDFAGHEGTIRTGDVQWMTAGRGIIHSEMPAEATNKGLQLWINLSANNKMIEPNYQEVVSEKIPSAEEDGVEVRVIAGEAMGIHSPVYTTTPTMFLDFSMKPGSQFHQIIPESWNSFVYVIEGEGVFGSPNSSPNMAHHVLVLSNGNGLSIWNNSSKGLRFVLIGGQPINEPVVQYGPFVMNTQHEIDKTIEDYHYSKNGFEMGKYFKSQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0005 293 CDD cupin_pirin_C 175 251 - -
Lan9g0005 293 CDD cupin_pirin_N 31 127 - -
Lan9g0005 293 Gene3D Jelly Rolls 27 278 IPR014710 -
Lan9g0005 293 PIRSF Pirin 12 289 IPR012093 -
Lan9g0005 293 PANTHER PIRIN-RELATED 6 293 IPR012093 -
Lan9g0005 293 SUPERFAMILY RmlC-like cupins 14 288 IPR011051 -
Lan9g0005 293 Pfam Pirin C-terminal cupin domain 178 282 IPR008778 -
Lan9g0005 293 PANTHER PIRIN-LIKE PROTEIN 6 293 - -
Lan9g0005 293 Pfam Pirin 33 125 IPR003829 -
Lan9g0005 293 Gene3D Jelly Rolls 147 252 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0005 Lan-Chr9 26346 28305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0005 13 288 Calmodulin-binding Proteins AT3G59220 66.187 2.92e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0005 K06911 - gmx:100775597 510.375