Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0003 ATGGGTTGCTTTTCATGTTTTGAATCGTTGGAAGATGAGAAGCTCAATACTCATTCTGAGCAGCAATATCAGCACCAGCAACAACAACAACAACAACAACAACAAACCAATCATAATCTTCGCAAACACCAACCTCCTACTCCTCCTCATATTTCCAGAATGCCCTCTGACAAATCACAATCTAGAACTAATCGGGATTCGAAAAGGGAAGAGCCTGCTCCTAATGCTATTCATATACCTGGTGTCCAGATTGCTGCTCAAACTTTTACTTACCGTGAACTTGCAGCCGCAACCAAAAACTTCAGGCCAGAGTCCTTTATAGGGGAAGGTGGTTTTGGATGTGTGTATAAAGGGTGGCTGGAAAGCACTAATCAGATTGTTGCTGTTAAACAGTTAGACCGAAATGGTCTTCAGGGTAATCGTGAATTCCTCGTGGAGGTTCTCATGCTCAGCCTGTTACATCATACTAATCTTGTGAATCTGATTGGATACTGTGCGGATGGGGACCAACGCCTTCTTGTATATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCACGACCTTCCTCCTGATAAGGAACCGCTAGATTGGAACACTAGGATGAAAATAGCTGCTGGTGCTGCAAAAGGATTAGAATACCTGCATGACAAGGCAAATCCTCCTGTCATTTATAGGGACTTAAAGTCGGCTAATATATTACTTGATGAAGGATTTCACCCAAAGCTTTCTGATTTTGGTCTTGCAAAGCTTGGTCCTGTCGGTGACAAGTCCCATGTTTCTACCCGTGTCATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAGTCTGATGTATATAGCTTTGGTGTCGTTTTGTTAGAGCTGATTACTGGCCGGAAAGCAATTGATAGCAACCAACCCCATGGAGAACAAAATCTTGTCTCTTGGGCATGTCCGCTGATTAACGACCGCAGGAAGTTATCAAAGTTGGCTGATCCGAAGCTGCATGGGCGGTTACCCATGCGAGGTCTTTATCAGGCTCTTGCTGTGGCATCGATGTGTATCCAGGAATCGGCTGCTGCACGCCCTCTGATTGGAGATGTGGTGACGGCCCTCTCTTATCTGGCTAGCCAGGCATATGACCCTAAGGGATCCAGTGGCGATGATAAAAGGAATAAAGACGATAAAGGCGGACGAATACTGAAGAACGATGAAGCTGGTGGATCTGGACTCAAATGGGACTTGGAAGGATCTGAGAAAGATGACTCCCCGCGAGAAACTGCAAGGATGATAGATAGAGAACGTGCCGTGGCTGAAGCCAAGTTGTGGGGAGAGAACTTGAGAGAGAAAAGGCGACAAAGTGCACCACCAGGCAATTTTAATGATTCTAATACCTAG 1407 0.4534 MGCFSCFESLEDEKLNTHSEQQYQHQQQQQQQQQQTNHNLRKHQPPTPPHISRMPSDKSQSRTNRDSKREEPAPNAIHIPGVQIAAQTFTYRELAAATKNFRPESFIGEGGFGCVYKGWLESTNQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHTNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSANILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVLLELITGRKAIDSNQPHGEQNLVSWACPLINDRRKLSKLADPKLHGRLPMRGLYQALAVASMCIQESAAARPLIGDVVTALSYLASQAYDPKGSSGDDKRNKDDKGGRILKNDEAGGSGLKWDLEGSEKDDSPRETARMIDRERAVAEAKLWGENLREKRRQSAPPGNFNDSNT* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0003 468 Gene3D Phosphorylase Kinase; domain 1 85 177 - -
Lan9g0003 468 Gene3D Transferase(Phosphotransferase) domain 1 178 400 - -
Lan9g0003 468 MobiDBLite consensus disorder prediction 383 468 - -
Lan9g0003 468 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0003 468 SUPERFAMILY Protein kinase-like (PK-like) 77 375 IPR011009 -
Lan9g0003 468 MobiDBLite consensus disorder prediction 59 73 - -
Lan9g0003 468 PANTHER OS07G0668900 PROTEIN 1 461 - -
Lan9g0003 468 CDD STKc_IRAK 107 375 - -
Lan9g0003 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lan9g0003 468 MobiDBLite consensus disorder prediction 387 405 - -
Lan9g0003 468 SMART serkin_6 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0003 468 Pfam Protein kinase domain 104 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0003 468 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 461 - -
Lan9g0003 468 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Lan9g0003 468 MobiDBLite consensus disorder prediction 15 79 - -
Lan9g0003 468 MobiDBLite consensus disorder prediction 417 455 - -
Lan9g0003 468 MobiDBLite consensus disorder prediction 20 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0003 Lan-Chr9 15521 18589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0003 1 455 Glycoside Hydrolase AT3G07070 56.645 1.60e-168 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan9g0003 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0003 K13430 - qsu:112033137 713.761