Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1946 ATGGCTTCTTCTAATGGTGGTGTGCCACCAGGGTTTAGATTTCACCCGACGGATGAAGAGTTGCTCCATTACTACTTGAAGAAAAAAGTGACCTTTCAAAAGTTTGACATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGACTTACAAGAAAGATGTAGAATTGGATCAACACCACAAAACGAGTGGTATTTTTTCAGTCACAAGGATAGAAAGTATCCAACAGGGTCAAGAACAAATAGAGCAACAAATGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGTGCATTAGGAACACATACAAGAAAATTGGAATGAGGAAAACACTTGTGTTCTACAAAGGTAGAGCTCCTCACGGACAAAAGACTGATTGGATCATGCATGAATACCGCCTAGAAGATGCCAATGACCCTCAAACAAATAACAATGAAGACGAGTGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTCAAGATTGGAAATGAAGGTGGGTCCACACAACAACTCAATAATTTCTCATCAGACACCAATGCTCGCTCCTTCATGCATCATCGAGAGAACCACTACTTACTGCATCATCATCAACAACAACAACAAAACCCTAGGAACCCCTCAGGTTCAGGTTTTGAGCTTGATAAGCCCGAGCTTGGTCTCCATTATCCCCTCTTGCAGCACCAAAACCCTCACTACTCACTCTTCCACTCCCAACAATCTCTTCTCCAAACCCACAAAGACGTTGATTATGACTACTCATATGCATCAGGTATACCGTCAGTTCCACCTTTGATAGTGAAGCAACTCATGACAAATCCTAAAGACTGCGAGAGTGGTAGTGAGGGCCTGAGGTACCAAATATCGGAGGCAGGCATGGAAGTTGGGTCGTGCGAAGCAGCAGGTGGTGGAGGAAGAACGGGTGAAGGAATGAATGAATGGGGTGTGCTTGATAGGCTTGTGACCTCTCATCTTGGAAACAACCAAGACTCAACCAAAGCGGTTAGGTTTGAGGATGATGCAGCAAATCCACACAACATCAACCAACTTTCTTTGCGTGGAGAGATGGACTTTTGGGGCTATGCTAAATAA 1101 0.4423 MASSNGGVPPGFRFHPTDEELLHYYLKKKVTFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDANDPQTNNNEDEWVVCRVFKKKNLFKIGNEGGSTQQLNNFSSDTNARSFMHHRENHYLLHHHQQQQQNPRNPSGSGFELDKPELGLHYPLLQHQNPHYSLFHSQQSLLQTHKDVDYDYSYASGIPSVPPLIVKQLMTNPKDCESGSEGLRYQISEAGMEVGSCEAAGGGGRTGEGMNEWGVLDRLVTSHLGNNQDSTKAVRFEDDAANPHNINQLSLRGEMDFWGYAK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1946 366 PANTHER PROTEIN BEARSKIN2-LIKE 5 332 IPR033519 -
Lan8g1946 366 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lan8g1946 366 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Lan8g1946 366 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 332 - -
Lan8g1946 366 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lan8g1946 366 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1946 Lan-Chr8 25432042 25434063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1946 1 363 NAC Transcription Factor Family AT1G33280 54.348 1.73e-124 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1946 NAM 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1946 - - adu:107477630 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1946 8 25432042 25434063 Lan13g0020 13 107047 109410 LSH