Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1935 ATGAAGAGATTAAGATCCAGCGAGGATCTTCATTCCTACGGTGACAAGAAAGATTCTAATTCTAATTCTAATTCTAGTTCCAATCTCAACCGCACTTTTTCTTCTTCTTCTTCTGCCCAACGAACCACTTTCTACTACAAATCTGATAACGCACGCAACCCTTTAATCTATTCCTCCCCCTCTTCCTCTCGCTACGACAGAGATCGTACTCTCGACGATGATCGCGATGCTTCCAGGTCTCTCAGGAAGCATGATCTGGATCGGAGGAGGTACAGGGACGGCGGCGGCGGTGGTAGTGGTGGTGGAGATAGGAGTATGACGCCGAGGTCTGAGAGCCTCTGCGGTTCCAGGAGGGATGTACCAAAAGGGTTTCGGTCCGAAAGGGACCGTTCACGAAGGGAAGGGAGTGTTTCATCGTGGAGGAGAGGGTTGAAGGATTTTGATGAGAGAGGAAAGAGTAGAGTAGTTGTTGGAATGGAAGAGAGAATAGTGTTAACGCGATCACCCAGGAGTTTCAATGTTAAGTCCCCTACTTGGTCTAAGGATTCAGAGAGTGATCATTCTAAGAAGATGTCATCTGCTAAGTCTCTCTCCAAATCTAAGTCACCAACTTGTTCAAAGGATTCCGAGAGTGATCAATCGAAGAGTGTCGAACTCGTGAACAAGACTGAGGAGTTGCAACTTGAGAGTGCAACTAGCAGTGAAATGGAAGAAGGAGAGCTCAAACCTGAACCTGTGCTGCATATTCAACAACAACCACCTTCTCAACTTAACCCTGGAATTACAAGTGAAGATCAGCATTCTATTCCTTCCGAGATTGATGGCAAGCAAGTTCGAAATGAATGCCACACTAATGACACTGATACTGCTATGGATGAAGGACATCAGATTTCAAGTGAAAATGAGGAAAAACCTATGGAGGTTGTTGTTTCAGAGGTCAAAGATGCAGAACTGGAAGCTGATAAGGTGTCAGATGTCCAAGACGATCCAAACAAAAAGTTGATTGTTACCGACACTGAAATTGACACTGTTACTGAGTGTTTGAAGGATAACAAGAAAGATGAATGTGTGAAGGCTGTTATTGAGTGTGGGGAGGAGGAAACAAAGAAGGGTGCAGATATGGAGGTGTTGTTGTCTAATGAAGAGGAGCATAAGCAGGAGAAGGGTGTGGATGTCGAAAGTAGCTCAGATGTTGACATACCTCAGTTAAAAGATGAAGTCTCGACCGAAAATGAAGCTGCCAAAGAAGTAATAAATAGAGAAACAATGACGGAAACAGTGGCCAACAACAATGCCAGGGACAAAGGCAAAAGCATATCTGTTACACCTACCGATGTTGCTCATTCTTCAGAAAATGCCTTATGGATTGATAAAGGGCCGAGAGACCTTGCAACATGTGCTGCTGATGTTATTGAAGGTCCAAGCACAAGGGGGTTCGAGTTGTTTTCGAGATCTCCTGTTAGAAAAGTTGAAAAAACAGGACACTCGGATCTCAACAAGCAGAAGGACGAGAGTCTTGGAATGGAGCAACTTGATCTTTCTCTTAGTTTGCCAAATGTTCTATTACCTGTTGGTGCTCTTGAGACAACAACCCAAGTCCCTGGATCCCCGAGTCAGGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTTCTAACTCAGATGGTTTTACAGCATCCATGTCCTTTTCAGGTTCCCAATCACTCTATCATGACCCTAGCTGTTCTCTAACGAAAAATACATTGGACTTTGAACAATCTGTTGGCAGTCGCCCCTTATTCCAGGGAATAGATTGGCAAGCCCAGTCTCAAAGTGACCCCAAACAAAAAGAAGTTCAGTTTTCTCAGAGAGCTCCAACGAATGGAAATGGCTCTTTTCACCACTCTCAACCACCATGGGGCATTTTAGATGCTGTTAAAGTCCAACAACCTAGGGTTCTAGAAGGGAGCTCAAAATTGGTTAATGGACTTGAGAAGCACTTGAGTTTTCATAAGCATTTGTCAGGACACTCAAGACACCATGACGATGTTAGGTCTCCTTCACACAGTGTCGGGTCTCAAGACATTGGATCAAATTATAGTTTTGAGAAAAAGAGGGATATTAGAGACAGGAATAGTGGTGGTTTGAATCGAACTACTAGCTACAAGGAACAGGAACAAGTTCTGGGTGGTGGAGTTGATTTTGTTGAGACAATCATTGCGAAGATAGTTTCTGAATCTGTGCATGTAATGTCCAGAAAGTTCCATGAAATGACTGGACAGTCCATGGCATGTCTGAAAGAGGGTATCCGTGAAGTCATGCTCAATGCAGATAAGCATGGGCAGATACTTGCTTTTCAGAAAGTTCTGCAGAACCGGTCTGATATTACGTTGGAGGTCCTACTGAAGTGCCACCGAGTGCAACTAGAAGTTCTGGTTGCATTAAAAACTGGTTTAACCCATTATCTTCACATAGACAACAACAACATTTCATCTTCGGAGCTAGCTCAAGTTTTTCTCAACTTAAGATGCAGGAATCTCTCATGTCGGAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGCATGCAGAAGAATGGTTTTTGCAGGGAATGCATGTGTCTTGTGTGTTCTAAGTTTGACGATGCGTCAAATACATGTAGTTGGGTTGGGTGTGATGTTTGTCTTCACTGGTGCCATACCGATTGTGGATTACGGGAATCTTATATTAGGAATGGACATAGTACAACTGGGATGAAGGGGATGACTGAGATGCAATTTCACTGCATTGCTTGTGATCACCCTTCTGAGATGTTTGGATTTGTCAAAGAGGTGTTTCATAATTTTGCAAAAGATTGGTCAGTTGAAACTCTTTGTAAGGAGCTTGAATATGTGAAGAGAATTTTTTCTTCCAGCAAGGATATGAGAGGGAGGCAGCTGCATGAGATTGCAGGTCTTATGCTGCCAAGGTTGGAAAATAAATCTAAACTTCCGGAGGTTTTGAGGCATATCATGTCTTTCCTTTCCGACTCTGGCGATTCTTCCAAATTAGCCAGGGCACCAAGCTTTTCTGGGAAGGAACCTGTTAAACACAACAATGGAGTAGCTGGGCCCAGCCAGGAAGCTGCTTGGTTGAAATCAATTTATCAAGAAAAGCCACCTTTGTTAGAAAGGTCAGCAAGCATCCTTCCTAGCTTTGACCGAAGTGATAAAAGGTCTCTAACGCAAGAGTTGCATATCAGTAGTGTCCAGAAAGACTTCGGTTTTGATGAATTGGAGAGTGTAATCAAAATTAAACAAGCAGAGGCTAAAATGTTTCAAGCACGTGCTGATGATGCAAGAAGAGAAGCTGAAGGTTTGAAACGCATTTCCCTTGCAAAGAATGAGAAACATGAAGAAGAGTATGCTAATAGAATCGCCAAGTTGCGATTGGCTGAGACTGAGGAAATGCGTAAACAGAAATTTGAAGAACTCCAAGCATTAGAGAGGGCACATTTGGAATATTTCAACATGAAAATGAGAATGGATGCAGACATCAGAGATCTATTATCTAAAATGGAAGCTACTAAAAGAAGCCTAGCCATGTGA 3570 0.4305 MKRLRSSEDLHSYGDKKDSNSNSNSSSNLNRTFSSSSSAQRTTFYYKSDNARNPLIYSSPSSSRYDRDRTLDDDRDASRSLRKHDLDRRRYRDGGGGGSGGGDRSMTPRSESLCGSRRDVPKGFRSERDRSRREGSVSSWRRGLKDFDERGKSRVVVGMEERIVLTRSPRSFNVKSPTWSKDSESDHSKKMSSAKSLSKSKSPTCSKDSESDQSKSVELVNKTEELQLESATSSEMEEGELKPEPVLHIQQQPPSQLNPGITSEDQHSIPSEIDGKQVRNECHTNDTDTAMDEGHQISSENEEKPMEVVVSEVKDAELEADKVSDVQDDPNKKLIVTDTEIDTVTECLKDNKKDECVKAVIECGEEETKKGADMEVLLSNEEEHKQEKGVDVESSSDVDIPQLKDEVSTENEAAKEVINRETMTETVANNNARDKGKSISVTPTDVAHSSENALWIDKGPRDLATCAADVIEGPSTRGFELFSRSPVRKVEKTGHSDLNKQKDESLGMEQLDLSLSLPNVLLPVGALETTTQVPGSPSQARSVQSLSNTFCSNSDGFTASMSFSGSQSLYHDPSCSLTKNTLDFEQSVGSRPLFQGIDWQAQSQSDPKQKEVQFSQRAPTNGNGSFHHSQPPWGILDAVKVQQPRVLEGSSKLVNGLEKHLSFHKHLSGHSRHHDDVRSPSHSVGSQDIGSNYSFEKKRDIRDRNSGGLNRTTSYKEQEQVLGGGVDFVETIIAKIVSESVHVMSRKFHEMTGQSMACLKEGIREVMLNADKHGQILAFQKVLQNRSDITLEVLLKCHRVQLEVLVALKTGLTHYLHIDNNNISSSELAQVFLNLRCRNLSCRSQLPVDECDCKVCMQKNGFCRECMCLVCSKFDDASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGMKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKDWSVETLCKELEYVKRIFSSSKDMRGRQLHEIAGLMLPRLENKSKLPEVLRHIMSFLSDSGDSSKLARAPSFSGKEPVKHNNGVAGPSQEAAWLKSIYQEKPPLLERSASILPSFDRSDKRSLTQELHISSVQKDFGFDELESVIKIKQAEAKMFQARADDARREAEGLKRISLAKNEKHEEEYANRIAKLRLAETEEMRKQKFEELQALERAHLEYFNMKMRMDADIRDLLSKMEATKRSLAM* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1935 1189 Coils Coil 1090 1117 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 65 94 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 172 306 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 665 712 - -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 747 769 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 786 801 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 801 816 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 828 849 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 874 894 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 947 966 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1084 1104 IPR004082 -
Lan8g1935 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1123 1145 IPR004082 -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 1 16 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 17 64 - -
Lan8g1935 1189 PANTHER PROTEIN OBERON 4 1 1189 - -
Lan8g1935 1189 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1189 IPR004082 -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 600 628 - -
Lan8g1935 1189 Pfam PHD - plant homeodomain finger protein 837 960 IPR032881 -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 269 306 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 381 410 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 1 142 - -
Lan8g1935 1189 CDD PHD_OBE1_like 867 926 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 220 234 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 665 681 - -
Lan8g1935 1189 Pfam Coiled-coil region of Oberon 1054 1177 IPR032535 -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 600 632 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 115 142 - -
Lan8g1935 1189 Coils Coil 1122 1158 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 205 219 - -
Lan8g1935 1189 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1935 Lan-Chr8 25374461 25379133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1935 819 986 PHD Gene Family AT5G57380 26.786 2.67e-13 72.4