Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1916 ATGAATAAGAGTAATGGGAGTGAGATTATGATGAGTTTCAGTAATAATAATAATAATAAATCATCAGTTTTCACTGTGTCTCAGTGGCAGGAATTGGAACATCAAGCATTGATATTCAAGTACATGCTTTCTGGTCTTCCTGTCCCTCTTCATCTTCTTCAACCAATTCAATTCTCCTTTTCTCATCCATTCTTTCACCATCCCTCATTGAGTTATTCTTCCTTCTATGGGAAGAAGATAGACCCTGAGCCAGGAAGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCTTACCCAGACTCCAAGTATTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACCATTACCATCCACTGTGACATCAGTGACTATTGCCGGTAGCAGCAGCGCAGCTGGAAACTTCCAGAACCTTGCTGCAAATGCCTTTGGTAATCTCCAAGGTACTGGTTCTGGAACCGGCCTTACCGACTACAATCTAGATTCCATTCCCTATGGGATTCCAAGTAAAGATTACAGGTATCTTCAAGGACTTAAATCTGAAGGTAATGAGCATAGCTTCTTTTCCGAAGTTTCCGAAAGCAACAAGGTCCCCCGAATGGAGTCACAGCTAGAAAACACATGGCCTTTGATGTCAACCAGACTTGCTTCTCATTCTACATTGAAATCAAATCATAATCCCACGTTGCAGAATGATTATCCACAACATTCATTTTTATCTAGTGAATATGCCTCAGGAGAAGCTGTGAAGCAGGAGGGTCACCCTCTTCGACCTTTTTTTAATGAATGGCCGAAAAGCAAGGAGTCATGGTTTGGTCAGGAAGATGAAAGATCCAACCAAACAGCTCTCTCCACAACTCAACTCTCGATATCCATTCCCATGGCATCTCCCGACTTCTCTGCATCGAACTCTTAA 960 0.4344 MNKSNGSEIMMSFSNNNNNKSSVFTVSQWQELEHQALIFKYMLSGLPVPLHLLQPIQFSFSHPFFHHPSLSYSSFYGKKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTPLPSTVTSVTIAGSSSAAGNFQNLAANAFGNLQGTGSGTGLTDYNLDSIPYGIPSKDYRYLQGLKSEGNEHSFFSEVSESNKVPRMESQLENTWPLMSTRLASHSTLKSNHNPTLQNDYPQHSFLSSEYASGEAVKQEGHPLRPFFNEWPKSKESWFGQEDERSNQTALSTTQLSISIPMASPDFSASNS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1916 319 MobiDBLite consensus disorder prediction 113 132 - -
Lan8g1916 319 PANTHER GROWTH-REGULATING FACTOR 5 21 317 - -
Lan8g1916 319 MobiDBLite consensus disorder prediction 290 319 - -
Lan8g1916 319 ProSiteProfiles QLQ domain profile. 23 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan8g1916 319 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Lan8g1916 319 Pfam QLQ 24 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan8g1916 319 Pfam WRC 82 124 IPR014977 -
Lan8g1916 319 PANTHER - 21 317 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan8g1916 319 SMART QLQ_2 22 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan8g1916 319 MobiDBLite consensus disorder prediction 285 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1916 Lan-Chr8 25259024 25262368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1916 24 124 GRF Transcription Factor Family AT3G13960 61.111 2.19e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan8g1916 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1916 - - gmx:100787567 455.677