Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1912 ATGAGAGACGTTTGCAGAAACTTTCAGCGAGGGAGTTGTCAATATGGTGAGAGGTGTAGATATCTACATCAACAACAACAACAACAACAACCACAACAAAACACTAACAATCCATTCGGATTTGGAAACAAAAACAACAACAACAACAACAACAACAACAATCCCTTTGGATTCAAATATCTACATCAACAACAACAACAACAACAACCACAACAAAACACTAACAATCCATTCGGATTTGGAAACAAAAACAACAACAACAACAACAACAACAACAATCCCTTTGGATTCAAGCCTTTTGAAAACAAATGGAACCGTTCCAATCCTCAGAACGCCGTTTCACGTCAATCCGCTAATAATTCTCAACCACTCAATCACAATTGCACTGATCCTCAAGCCTGCAAGCGTCAGATTTCTGAAGATTTTCAGCAAGAAAAACCACTCTGGATACTTACATGCTATAGCCATTGTAAAGGTGCTGTTTGTGACATTGTTGGTGATGTTAGCTATGAAGAATTAAGGGCGGTAGCTTATGAGGATGCTAAGAAGGGGATGACTCTGCAATCGATAGTTGAAAAAGAGAGAAATATACTAAAATCTAAGATGGTTGAGTTTGAGAAGCTCCTTTCTCAACCCTACACAAAGCCACTGAATTCCTCTATTGACAGTCAAAATCAGCAGTCCATTGCAGCCAACACAAATCCGTTTTCAAGAACCACTCAAAATAGTGGTCCTTTGTCTGTCTCAAGCTTTAGCCAACTGGGTGCTTCATTGAACATGGGTTCTGAAAGGCCTTCTGCACCACTAATGAACAGTCCAGCACAGACCGGTTTCTTTGGAAACGGAAGTACACATCTAATGAGCACTCCGGTGCAGCCTAATTTATTTGGATTTGGAGTAGGAAACTCTTCAGCATCCAACACAGCAAGTCTAAGCGGCAAAGGCTTCTCAGGTGCTCAAAGTGGCCCCAATTCAAATACTCAGCAACCATCCACTGCTTCCAACGACTTTAGCTCATTTGCAATGTTTCAAACAACCTCGAATGTTCAGTTAAATAAGCCCCAAGTGGAGAATGTGTCTGGAGATGCCAGTATTTGGTTAAAAGAGAAATGGAATCCTGGAGAGATTCCGGAAGAAGCTCCTCCAGATGCTTTTGTTCGGTAG 1164 0.4124 MRDVCRNFQRGSCQYGERCRYLHQQQQQQQPQQNTNNPFGFGNKNNNNNNNNNNPFGFKYLHQQQQQQQPQQNTNNPFGFGNKNNNNNNNNNNPFGFKPFENKWNRSNPQNAVSRQSANNSQPLNHNCTDPQACKRQISEDFQQEKPLWILTCYSHCKGAVCDIVGDVSYEELRAVAYEDAKKGMTLQSIVEKERNILKSKMVEFEKLLSQPYTKPLNSSIDSQNQQSIAANTNPFSRTTQNSGPLSVSSFSQLGASLNMGSERPSAPLMNSPAQTGFFGNGSTHLMSTPVQPNLFGFGVGNSSASNTASLSGKGFSGAQSGPNSNTQQPSTASNDFSSFAMFQTTSNVQLNKPQVENVSGDASIWLKEKWNPGEIPEEAPPDAFVR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1912 387 SUPERFAMILY CCCH zinc finger 3 28 IPR036855 GO:0046872
Lan8g1912 387 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Lan8g1912 387 MobiDBLite consensus disorder prediction 309 335 - -
Lan8g1912 387 PANTHER MAKORIN-RELATED 51 385 IPR045072 -
Lan8g1912 387 PANTHER MAKORIN-RELATED 2 73 IPR045072 -
Lan8g1912 387 Gene3D - 1 79 - -
Lan8g1912 387 MobiDBLite consensus disorder prediction 24 128 - -
Lan8g1912 387 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Lan8g1912 387 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Lan8g1912 387 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 51 385 - -
Lan8g1912 387 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 73 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan8g1912 zf-CCCH_4 1.9e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1912 K14321 - gmx:100814339 396.356