Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1905 ATGGGATCGCGGTCCCCAAAATCATGTGGAGAGGAATATGAGGGGGAAGAGGGTTGTGGAACCACGGTTTCGGGCCAATCAGGGTCAACTAGCAGAAGTGCTGGGCTTCCATCTAGCCGGAGTGACCAGGCATTGGTTGCAACAGCTGGTGATAGCACTTTTCTCAGATTAAACCATCTTGACTTGCATGGAGATGATGCTGGATCACAGGAAGCGGTTGCTAGCAAGAAGAAAAGGAGAGGTCAACGGGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTTCGACAATTTAGTATGAAAGTGTGTGAGAAGGTAGAAAGCAAGGGAAGAACAACTTACAATGAGGTAGCAGATGAACTTGTTACTGAATTTTCCGATCCAAGCAATAGTGTTTTGTCACCTGACCAGCAACAGTATGATGAGAAAAACATCCGTCGAAGGGTCTATGATGCTCTCAATGTTCTCATGGCAATGGATATCATTTCTAAGGATAAAAAGGAAATTCAATGGAAGGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAACTAAAGACAGAGCGTCTTGGACTCAGGAATAGAATTGAGAAGAAAGCAGCCTATCTTCAAGAGCTGGAGGATCAACTTGTAGGTCTTGAGAACCTTATACAACGAAACGGGCAATTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCATTGCCTTTCATTTTAGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGTACTCCTTTTGAGCTGCATGATGACAATTATGTTCTCAAGGCAATGAAACTTTCTGAGAGACCGCAAAATGATAATATGGCACCCAATGATGGTGGTGAAGGTTCTAGCATGCCAGGATTGTATCAATCACAAGTTCCTCCTCCAGTTTCAAACCTTCCAGTTAGGCCTCCCTTGTCACCTCCACTCCCCGGAATATTAAAGGCAAGAGTTAAGAATGAGCATTAG 1020 0.4382 MGSRSPKSCGEEYEGEEGCGTTVSGQSGSTSRSAGLPSSRSDQALVATAGDSTFLRLNHLDLHGDDAGSQEAVASKKKRRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVTEFSDPSNSVLSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKAAYLQELEDQLVGLENLIQRNGQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKLSERPQNDNMAPNDGGEGSSMPGLYQSQVPPPVSNLPVRPPLSPPLPGILKARVKNEH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1905 339 MobiDBLite consensus disorder prediction 314 328 - -
Lan8g1905 339 PANTHER DP TF 21 339 - -
Lan8g1905 339 SMART DP_2 179 337 IPR014889 -
Lan8g1905 339 Coils Coil 188 222 - -
Lan8g1905 339 Pfam Transcription factor DP 180 309 IPR014889 -
Lan8g1905 339 Gene3D Transcription factor DP 178 307 IPR038168 -
Lan8g1905 339 PIRSF Txn_factor_DP 4 339 IPR015648 GO:0005667|GO:0051726
Lan8g1905 339 MobiDBLite consensus disorder prediction 20 44 - -
Lan8g1905 339 CDD DP_DD 177 280 IPR014889 -
Lan8g1905 339 MobiDBLite consensus disorder prediction 65 92 - -
Lan8g1905 339 PANTHER TRANSCRIPTION FACTOR DP 21 339 IPR015648 GO:0005667|GO:0051726
Lan8g1905 339 Pfam E2F/DP family winged-helix DNA-binding domain 92 172 IPR003316 GO:0005667|GO:0006355
Lan8g1905 339 SUPERFAMILY "Winged helix" DNA-binding domain 92 173 IPR036390 -
Lan8g1905 339 MobiDBLite consensus disorder prediction 282 339 - -
Lan8g1905 339 MobiDBLite consensus disorder prediction 287 313 - -
Lan8g1905 339 SUPERFAMILY E2F-DP heterodimerization region 178 301 IPR037241 -
Lan8g1905 339 SMART E2F_TDP_2 89 172 IPR003316 GO:0005667|GO:0006355
Lan8g1905 339 MobiDBLite consensus disorder prediction 1 44 - -
Lan8g1905 339 Gene3D - 85 177 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1905 Lan-Chr8 25206581 25211042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1905 90 288 E2F-DP Transcription Factor Family AT5G02470 55.000 2.36e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lan8g1905 DP 8.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1905 K04683 - qsu:112000390 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1905 8 25206581 25211042 Lan13g0093 13 541770 545923 LSH