Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1904 ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACAACTCATTAACCAAAAGCAACAACAAGATCAACAACACCAACACCAAAACCAACACCAACACCAACACCAAAACCAGCACCACCTTTTTGGTATTACCCCTCCTCTTTCATGGACCCCTTTCTCTGATTTTCATTACCCTTCTGATCCTTCTTCCTTCCACTTCGACGACTTCGACGATGACTGGGTAGACTCCCTTATCCCCACCACCACCACCACCACCACCGCCGCCAACGACAGTGCTGATCTTAACCGCCTCTTCTCACCAAATGACGCCTTCAAACCACCGCTAACGCCGGTTACTCCCCACTCTGCACCGCACCCACTTCTCAAATCTCTAATCGATTGTGCTGCTCTCATACAAACTTCACCTGATCGTGCTCTTCACTCACTTACCCATTTAACCAAATCAGTGTCTCAACATGGGAACCATACCCAAAGAGTTGCTTTCTACTTTGTTGAAGCTCTCACTCGAAAACTTGAACTGGAGAATGAAAAAGATCGTAACTTTATTACTGGGGTGGCTCCGATTAGTACTATTTCTGAGGAGTTAACACTGTGTTACAAGGCTCTCAATGATGCATGCCCTTATTCCAAGTTTGCTCATTTAACCGCTAACCAAGCTATTCTTGAAGAAACTGAAGGTTCCACGCACATTCACATTGTTGATTTTGGAATTGTTCAAGGTATTCAATGGGCTGCTTTGTTACAAGCTTTTGCAACTCGTTCTTCTGGGAAACCTGAAAGTGTAACCATTTCTGGGATTCCAGCTATGGCACTTGGAACTTCACCAGCTAATTCTCTTTCTGCTTCTGGTAAACGTTTATCTGAGTTTGCAAAGCTTTTGGGCTTGAATTTTGAGTTTAGACCAATTCTCAGTCCTATTCATGAGCTCAATGAAAAAAGCTTTTGTGTGAAACCAAATGAAGCTTTGGCTGTTAATTTCATGCTTCAGTTGTATAATCTATTGGATGATGATGAAGGTGATGCTGCTTCAACTGCAGTTCACACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAAGATTGTTACTCTTGGAGAGTATGAGGCTAGTGTGACAACCCGGGATGGGTTTTTGAACAGATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTCGAGTCTCTCGATCCTAATTTGCCTGCAGATTTGCCTGAGAGGTTGCAGGTGGAAAGCCTTTTGCTTGGGCGCCGAATCGCTGCTGCGGTTGGAGCAGAGGTTCCCGGGAGTGTAAGGGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGTGCTGGTTTTGAATCAGTGGGTCTCAGTCATTATGCAATTAGTCAAGCTAAGATTCTTCTATGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAATCTGAACCTGGTTTTTTGTCTCTGGCTTGGAAAGATGTTCCTCTATTAACTGTTTCTTCATGGCGTTAA 1518 0.4387 MAYMCADSGNLMAIAQQLINQKQQQDQQHQHQNQHQHQHQNQHHLFGITPPLSWTPFSDFHYPSDPSSFHFDDFDDDWVDSLIPTTTTTTTAANDSADLNRLFSPNDAFKPPLTPVTPHSAPHPLLKSLIDCAALIQTSPDRALHSLTHLTKSVSQHGNHTQRVAFYFVEALTRKLELENEKDRNFITGVAPISTISEELTLCYKALNDACPYSKFAHLTANQAILEETEGSTHIHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFAKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDAASTAVHTALNLAKSLKPKIVTLGEYEASVTTRDGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAAAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKILLWNYSYSSLYSLVESEPGFLSLAWKDVPLLTVSSWR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1904 505 Pfam GRAS domain family 126 505 IPR005202 -
Lan8g1904 505 ProSiteProfiles GRAS family profile. 116 505 IPR005202 -
Lan8g1904 505 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 126 504 - -
Lan8g1904 505 MobiDBLite consensus disorder prediction 20 42 - -
Lan8g1904 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 504 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1904 Lan-Chr8 25201529 25203710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1904 124 505 GRAS Transcription Factor Family AT5G66770 62.304 4.03e-159 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan8g1904 GRAS 7.9e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1904 - - vra:106779206 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1904 8 25201529 25203710 Lan13g0094 13 550555 552755 LSH