Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1875 ATGAGTGAGGAAATTACACTTCCAGGGTTCAGATTTCATCCCACAGATGAAGAACTTGTTGATTTCTATCTTAAGAACATGGTTGCCAACAAACTTCGTTATGATATCATTGGTTTCCTCAACATCTATCACCATGATCCTTGGAACTTGCCTGGGTTGTCAAAAGTGGGGGAAAGAGAATGGTACTTCTTTGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGACCTAACAGAACAACTGAGAAAGGGTTTTGGAAAGCCACTGGTTCTGATAGGAGAATTGTGACTTTATCTGATCCTAAGAGAATCATTGGGTTGAAGAAAACCCTTGTTTTCTATGAAGGAAGAGCTCCTAGAGGAAACAAAACTGATTGGATTATGAATGAATACCGTTTACCAGACACTTGTAACTTACCTAAGGAAATAGTGTTGTGCAAGATATATAGAAAAGCAACTTCATTGAAAGTGTTAGAACAAAGGGCAGCATTAGAGGAAGAGATTAAGCAATTGGTTAGTTCCCCTACAAATTCTATGGACACAATGTCCTTCATTGAAGATCAAAACATGCTTCAACAACATGTTATTCTTAAGAAAGAATCTGAAGGTAATGAAGAAATGTTATCAGTGCCAATGCAAGAAAATACAAGGACTCAAATGCCTATCATAGAAAACAAAAACAAAATGACTTGTGGTACATTACTACAATTACCCTTAGGAAATGATAAACTTCCAGAGCTACAACTACCTATGATGATCACTGATTGGACCCAACTCACCCAAGATAACTTCTGGGCTCAGTTGAATAGTCCATGGCTTCAAAACTTCACTCCTAGTTACTCCAACATCTTAAACTTTTAG 861 0.3763 MSEEITLPGFRFHPTDEELVDFYLKNMVANKLRYDIIGFLNIYHHDPWNLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRRIVTLSDPKRIIGLKKTLVFYEGRAPRGNKTDWIMNEYRLPDTCNLPKEIVLCKIYRKATSLKVLEQRAALEEEIKQLVSSPTNSMDTMSFIEDQNMLQQHVILKKESEGNEEMLSVPMQENTRTQMPIIENKNKMTCGTLLQLPLGNDKLPELQLPMMITDWTQLTQDNFWAQLNSPWLQNFTPSYSNILNF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1875 286 ProSiteProfiles NAC domain profile. 6 151 IPR003441 GO:0003677|GO:0006355
Lan8g1875 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 286 - -
Lan8g1875 286 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 4 286 - -
Lan8g1875 286 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Lan8g1875 286 Gene3D NAC domain 15 155 IPR036093 GO:0003677|GO:0006355
Lan8g1875 286 SUPERFAMILY NAC domain 6 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1875 Lan-Chr8 25003740 25005286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1875 1 278 NAC Transcription Factor Family AT2G17040 58.865 2.76e-113 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1875 NAM 5.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1875 - - gmx:732555 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1875 8 25003740 25005286 Lan13g0118 13 699941 701874 LSH