Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1866 ATGGCTTTGTTTTCAACTACTTTAAATTTTGTTCAACTTGTTATGGTTCTTATATGTTTAACCAAACATGTTTTGAGTAGTAGTTACCTTAGCCATGATGTAGTAGCAGAGCAAGAAGCAGATAGAGTGCATGGTTTACCAGGACAACCTACGGTGAAGTTCAAACAATATGCAGGTTATGTCACTGTCAATAAAACTCATGGAAGAGCATTGTTCTATTGGTTCTTTGAATCCACTGAGAAATCACAAGATAAACCTCTTCTTCTATGGCTCAATGGAGGTCAAGGTTGTTCCTCCGTTGGCTACGGAGAAGCCGAGGAGCTGGGACCCTTCTTTCCTCAGAAAAGCAACCACCCAAAGTTAAAGTTGAATCCCTATTCTTGGAACAAAGCTACAAATCTTTTGTTTGTGGAATCTCCTGTTGGTGTGGGATTCTCATACACCAATACTAGCAGTGATATCAATGAACTTGGTGACACAATTACTGCTAAGGATTCACACAACTTTGTTATCAATTGGTTTAAGCGATTTCCACAGTTCAGATCACACGAATTCTACATTGCAGGTGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCTGAGCTCATTTTGGATAATAATCATAATCCAACCAAGGAAGATTACATTAACTTTAAAGGGTTTCTGATTGGAAATGCATTGTTGGATGATGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCTGTAATATCTGATGGTTTATACCATAATATCACAACAGCATGCAACTTCAGTCTTCCAAATAGTTCAGATGCATGCACAATGGAACTTGATAAGTACTTTGATGTGTATAAGCTTATTGACATGTATAGCTTATATGCTCCAAGGTGTTTCAGCAACCAAAGTAGCACTACAAGGGAACCCCATGTTATCAAAGGCGTAGCTCCTCACACTTTTTCCAAATTTGATGGGTGGCATAAAATAGCAGCAGCAGGATATGATCCTTGTGCATCAGATTACACAGAAGTGTATCTAAATAGGCCAGAAGTACAAAAGGCATTGCATGCCAATGTCACCAAAATTCCTTATCCATGGACTCATTGCAGTGATAATATCACATTTTGGAATGATGCTCCACATTCCATCCTTCCAATCATTAAGAAGCTCATTGCTGGTGGAATTCGCATATGGGTTTACAGTGGAGACACAGATGGAAGAATTCCTGTAACTGCAACAAGATACACACTTAGAAAACTTGGCCTCAATGTTGTTCAAGATTGGACTCCCTGGTATACTAGTCAGCAGGTGGGAGGATGGACTATTGTTTATGATGGACTCACGTTTGTGACCATAAGAGGTGCTGGTCATCAAGTTCCTACATTCGCTCCTAAACAAGCTCTTCAGCTAATTCAACATTTCTTGGATAATAACAAGTTACCACCTCATCCAATTTAA 1449 0.392 MALFSTTLNFVQLVMVLICLTKHVLSSSYLSHDVVAEQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGGQGCSSVGYGEAEELGPFFPQKSNHPKLKLNPYSWNKATNLLFVESPVGVGFSYTNTSSDINELGDTITAKDSHNFVINWFKRFPQFRSHEFYIAGESYAGHYVPQLSELILDNNHNPTKEDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTTREPHVIKGVAPHTFSKFDGWHKIAAAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDAPHSILPIIKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLNVVQDWTPWYTSQQVGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLIQHFLDNNKLPPHPI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1866 482 SUPERFAMILY alpha/beta-Hydrolases 38 477 IPR029058 -
Lan8g1866 482 Pfam Serine carboxypeptidase 47 474 IPR001563 GO:0004185|GO:0006508
Lan8g1866 482 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Lan8g1866 482 Gene3D - 380 473 - -
Lan8g1866 482 Gene3D alpha/beta hydrolase 37 297 IPR029058 -
Lan8g1866 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Lan8g1866 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Lan8g1866 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Lan8g1866 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Lan8g1866 482 PANTHER CARBOXYPEPTIDASE 15 481 - -
Lan8g1866 482 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Lan8g1866 482 Gene3D - 334 371 - -
Lan8g1866 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 481 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1866 Lan-Chr8 24952246 24957805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1866 342 477 Calmodulin-binding Proteins AT2G22960 30.657 4.95e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1866 K16297 - gmx:100781503 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1866 8 24952246 24957805 Lan13g0138 13 808511 812883 LSH