Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1857 ATGCTGGGAGATGAGATTGGGAAGGGAGCCTATGGTCGAGTTTTCAAAGGTTTGGACCTAGAGAATGGACACTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACGTCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAATCACAAAAACATTGTAAAGTATCTTGGATACTCAAAGACAGAGAGTCATCTGCACATAATTTTGGAGTATGTCGAGAATGGCTCGCTTGCAAATATTATCAAGCCCAATAACTTTGGACCATTTCCAGAATCATTGGTTGCAGTTTATATTGGCCAGGTTTGTAGGTGTAAGACAATTCATTGA 348 0.3822 MLGDEIGKGAYGRVFKGLDLENGHFVAIKQVSLENIAQEDLNVIMQEIDLLKNLNHKNIVKYLGYSKTESHLHIILEYVENGSLANIIKPNNFGPFPESLVAVYIGQVCRCKTIH* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1857 115 SUPERFAMILY Protein kinase-like (PK-like) 2 110 IPR011009 -
Lan8g1857 115 Pfam Protein kinase domain 4 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1857 115 ProSitePatterns Protein kinases ATP-binding region signature. 6 29 IPR017441 GO:0005524
Lan8g1857 115 PANTHER MAP3K EPSILON PROTEIN KINASE 1 1 108 - -
Lan8g1857 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1857 115 SMART serkin_6 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1857 115 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Lan8g1857 115 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1857 Lan-Chr8 24880784 24882634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1857 1 108 MAP Kinase Kinase Kinase AT3G13530 91.667 3.23e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lan8g1857 Pkinase 3.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1857 - - lang:109354046 234.958