Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1856 ATGCCGGAAAGTCGTATATGTGAGTTGGAAAATACATTGGAGTTGAAGTTTAAGGTTTTAGAAAGAAGTTTCAGAGAGTCTGTAAAGAATTTGGTTGAAGAATCCTTCCACAAGCACAAGGAGGAGGAAATATCAAAACGGAGATCAAAGCATCACGAATCACATCGGGTACAAGATGGAGTCCCAGATTTCAGAACTAACAGAATCACAGGGAGAAAGAAGCCGCCATTGCGTATACTGATTGACAACAAATATATGCTGGGAGATGAGATTGGGAAGGGAGCCTATGGTCGAGTTTTCAAAGGTTTGGACCTAGAGAATGGAGACTTCGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACGTCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAATCACAAAAACATTGTAAAGTATCTTGGATACTCAAAGACAGAGAGTCATCTGCACATAATTTTGGAGTAA 489 0.3885 MPESRICELENTLELKFKVLERSFRESVKNLVEESFHKHKEEEISKRRSKHHESHRVQDGVPDFRTNRITGRKKPPLRILIDNKYMLGDEIGKGAYGRVFKGLDLENGDFVAIKQVSLENIAQEDLNVIMQEIDLLKNLNHKNIVKYLGYSKTESHLHIILE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1856 162 ProSiteProfiles Protein kinase domain profile. 85 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1856 162 PANTHER MAP3K EPSILON PROTEIN KINASE 1 81 162 - -
Lan8g1856 162 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 81 162 - -
Lan8g1856 162 SUPERFAMILY Protein kinase-like (PK-like) 77 162 IPR011009 -
Lan8g1856 162 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Lan8g1856 162 Pfam Protein kinase domain 86 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1856 162 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1856 Lan-Chr8 24879168 24880656 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1856 81 162 MAP Kinase Kinase Kinase AT3G13530 91.463 5.83e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lan8g1856 Pkinase 6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1856 - - lang:109355523 325.479