Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1853 ATGCCTATGACTAGGAGATGCATAAATTCTGATACGATTAAGGACATCGAGAATGATCTTGGTGCACAAGCACAGGATTGCTACATAGCAGTGGAGACTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCATACCGAAATGAGTTTTTTAATAAGGTTGAAGAGATGTTTGACAAGTTATCTGGCCCCGTAGTGTTGATTTGTGGGGAGAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAATTTTGGACGTGCTTCTAAGCTGCCTCTGTCTCTGAAACGATTGACTGACGGATTTAAAGGGGCCAAGAGCTCGGAAGATGATGATGTTCAAAAGCTTTTCTCTAATGTTTTGTGTGTACATCCACCTAAGGATGATAACCTTCTGGCAACATTTAAGAAACAGCTTGATGAAGACAGGAAATTTGTGATTTCACGTAGCAATTTGAATGAACTAAGGAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTGCATGTAAATACCGATGATGTCATCTTGACAAAGCAAAGTATGAAACCGCTTCCAGATTTTAAGACTATTAACCTTATTCTTACATATGCACTTGTCCTTTCTTCCTCAACCATTGTATCTCTACCTTCTAATTTGCACTCTAGCGTCATGTCATGTTCAAACAATGTTTTTACATCATTTATTCTGTTTTCAGAAGCTGAAAAGAGCCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCTGCCGTAGTACCTTCTGATGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGGTAATGAATCTTGTTTTTGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACTCTACTGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTAACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCCCTTGAACACGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTCATTCTTGGTGCAACAAACAGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTGAGAATAGTCCTTGCACAAGAAAATTTGGTTCCCAGTTTTGAGTATGACAAACTTGCTAAGTTGACTGAAGGTTACTCTGGCAGTGACTTGAAGAACCTTTGCATTGCCGCTGCATACAGGCCAGTTCAAGAGCTCATAGAGGAAGAGAAAAAGGTACGGCGCTTTATATACGAGACTTGCTTGGAGGTGAAATTTGCAAACTATCTTTTTAATTTGTTCACAGTTAAGGACATCGAGAATGATCTTGATGCACAAGCACAGGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTCTGAAATGCAGACAACCTCTTATTGTCTATTTTCCGGACAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCATACCGAAATGAGTTTTTTAATAAGGTTGAAGAGATGTTTGACAAGTTATCTGGCCCCGTAGTGTTGATTTGTGGGGAGAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAATTTTGGACGTGCTTCTAAGCTGCCTTTGTCTCTGAAACGATTGACTGATGGATTTAAAGGGGCCAAGAGCTCGGAAGATGACGATGTCCAAAAGCTTTTCTCTAATGTTTTGTGTGTACATCCACCTAAGGATGATAACCTTCTGGCAACATTTAAGAAACAGCTTGATGAAGACAGGAAATTTGTGATTTCACGTAGCAATTTGAATGAACTAAGGAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTGCATGTAAATACCGATGATGTCATCTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGCTGGGCAAAAAATCATTACTTGTCATCGTGCTTGCTTCCTTCTGTTAAAGGAGAACGATTGTGCCTCCCCCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAGGGCCAAGAAACTTTATCACGGAAACCTTCTCAGAACCTCAAGAGCCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCCGTAGTACCTTCAGATGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACTCTACTGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTAACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCCCTTGAACACGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTCATTCTTGGTGCAACAAACAGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTGAGAATAGTCCTTGCACAAGAAAATTTGATTCCCGGTTTTGAGTATGACAAACTTGCTAAGTTGACTGAAGGATACTCTGGCAGTGACTTGAAGAACCTTTGCATTGCCGCTGCATACAGGCCAGTTCAAGAGCTCAGAGAGGAAGAGAAAAAGGGAATCAGTAATGGTACACCTTCAGTATTAAGGCCTCTTAATGTAGATGATTTTGTTGAGTCAAAAGCAAAGGTGGGGCCTTCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGATATGTATGGAGAAGATGGTAGTAGGACAAAATCACCATTTGGATTTGGGAGCTGA 3330 0.4069 MPMTRRCINSDTIKDIENDLGAQAQDCYIAVETLCEVLKSRQPLIVYFPDSSQWLHKSVPKSYRNEFFNKVEEMFDKLSGPVVLICGENKVQSGSKEKEQFTMILPNFGRASKLPLSLKRLTDGFKGAKSSEDDDVQKLFSNVLCVHPPKDDNLLATFKKQLDEDRKFVISRSNLNELRKVLEEHQLSCTDLLHVNTDDVILTKQSMKPLPDFKTINLILTYALVLSSSTIVSLPSNLHSSVMSCSNNVFTSFILFSEAEKSLAKDEFESNFISAVVPSDEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRVMNLVFGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGALEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIVLAQENLVPSFEYDKLAKLTEGYSGSDLKNLCIAAAYRPVQELIEEEKKVRRFIYETCLEVKFANYLFNLFTVKDIENDLDAQAQDCYIAVEALCEVLKCRQPLIVYFPDSSQWLHKSVPKSYRNEFFNKVEEMFDKLSGPVVLICGENKVQSGSKEKEQFTMILPNFGRASKLPLSLKRLTDGFKGAKSSEDDDVQKLFSNVLCVHPPKDDNLLATFKKQLDEDRKFVISRSNLNELRKVLEEHQLSCTDLLHVNTDDVILTKQKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAISRMKGQETLSRKPSQNLKSLAKDEFESNFISAVVPSDEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGALEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIVLAQENLIPGFEYDKLAKLTEGYSGSDLKNLCIAAAYRPVQELREEEKKGISNGTPSVLRPLNVDDFVESKAKVGPSVAYDATSMNELRKWNDMYGEDGSRTKSPFGFGS* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1853 1109 Gene3D - 815 1091 IPR027417 -
Lan8g1853 1109 Gene3D - 284 459 IPR027417 -
Lan8g1853 1109 ProSitePatterns AAA-protein family signature. 959 978 IPR003960 GO:0005524|GO:0016887
Lan8g1853 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 814 1036 IPR027417 -
Lan8g1853 1109 Gene3D - 460 523 - -
Lan8g1853 1109 Gene3D - 988 1073 - -
Lan8g1853 1109 ProSitePatterns AAA-protein family signature. 431 450 IPR003960 GO:0005524|GO:0016887
Lan8g1853 1109 Pfam ATPase family associated with various cellular activities (AAA) 856 986 IPR003959 GO:0005524|GO:0016887
Lan8g1853 1109 Pfam ATPase family associated with various cellular activities (AAA) 328 458 IPR003959 GO:0005524|GO:0016887
Lan8g1853 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 517 IPR027417 -
Lan8g1853 1109 Pfam AAA+ lid domain 1011 1045 IPR041569 -
Lan8g1853 1109 Pfam AAA+ lid domain 483 517 IPR041569 -
Lan8g1853 1109 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 19 524 - -
Lan8g1853 1109 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 550 1107 - -
Lan8g1853 1109 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 19 524 - -
Lan8g1853 1109 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 550 1107 - -
Lan8g1853 1109 CDD AAA 327 459 - -
Lan8g1853 1109 SMART AAA_5 852 989 IPR003593 -
Lan8g1853 1109 SMART AAA_5 324 461 IPR003593 -
Lan8g1853 1109 CDD AAA 854 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1853 Lan-Chr8 24845100 24875069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1853 284 525 Calmodulin-binding Proteins AT3G56690 35.918 1.18e-36 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1853 - - lang:109354045 2152.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1853 8 24845100 24875069 Lan13g0145 13 841381 852199 LSH