Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1848 ATGTTTCACTCTTATTATGTGTCTGCCACAGATTCTCAGAGTCCAACTGAGCCATCTGATTATACCCAAAGAACTTTTTCATTGCCACCACTGCCATCACCGCCACCGCTACCGCTGCCACCACCACCACCTCAAGTTCCTAGAAAGAAAAGGGTTCCATGGACTGAAGATGAACATAGGTTATTTGTGCATGGACTTACCATATATGGAAAGGGAGATTGGAAGGGTATTTCAAGAAACCTTGTTCTTTCCAAGACTCCAGCTCAAATTGCTAGCCATGCCCAGAAATATTTTATTCGTCAAAATGCTTCTCCGTCTTTGAATCCCTCGAGAAAAAGAAGAAGAAGTATTCACGACATAACCCTAACCATGCAAGAACCTTATCGTGTCATGCTTCCTCAACTCGTCCATAACGATGTTGTTGCACCACCACAAGAATTGCACCAAGGGCAACCAGTGTTACAACCTAATCCACCAACCGCGGATATAGATTCGAAGCTCATGGGTTACATGAACTCCCTTCCTCCTCTCTGCAATTGTCATTTCATTAACCACGACAATGAACTATTGCAGCAACCGCAACCACAACCGCAACCGCAATCACATTACGTTTCACATATGTACATGGATCCACAGGGCCAAACAATTTATGTCAACAGATATGGATATCAGAGTTAG 678 0.4366 MFHSYYVSATDSQSPTEPSDYTQRTFSLPPLPSPPPLPLPPPPPQVPRKKRVPWTEDEHRLFVHGLTIYGKGDWKGISRNLVLSKTPAQIASHAQKYFIRQNASPSLNPSRKRRRSIHDITLTMQEPYRVMLPQLVHNDVVAPPQELHQGQPVLQPNPPTADIDSKLMGYMNSLPPLCNCHFINHDNELLQQPQPQPQPQSHYVSHMYMDPQGQTIYVNRYGYQS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1848 225 MobiDBLite consensus disorder prediction 28 49 - -
Lan8g1848 225 Gene3D - 52 103 - -
Lan8g1848 225 MobiDBLite consensus disorder prediction 1 51 - -
Lan8g1848 225 Pfam Myb-like DNA-binding domain 51 98 IPR001005 -
Lan8g1848 225 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 101 IPR006447 GO:0003677
Lan8g1848 225 ProSiteProfiles SANT domain profile. 54 102 IPR017884 -
Lan8g1848 225 PANTHER TRANSCRIPTION FACTOR KUA1 47 173 - -
Lan8g1848 225 SUPERFAMILY Homeodomain-like 47 102 IPR009057 -
Lan8g1848 225 MobiDBLite consensus disorder prediction 1 27 - -
Lan8g1848 225 CDD SANT 53 98 IPR001005 -
Lan8g1848 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 102 IPR017930 -
Lan8g1848 225 SMART sant 50 100 IPR001005 -
Lan8g1848 225 ProSiteProfiles Myb-like domain profile. 46 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1848 Lan-Chr8 24824656 24825409 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan8g1848 Myb_DNA-binding 6.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1848 - - lang:109354044 414.461