Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1845 ATGATTCTCCAACCAGCTTCTGCGACTTTCACATTCTCGCACTTTTTCCATTCCCTCTGTCCTTGCAACAATCAAGTTAGCAACTTTGTTGCATTCCCTTTCTCCAGAAGAAGAAGAAAACGCTTCATTGCTCATTCCGGGTATCGAAAATTCCGAAGAAAAATTAGTCTTCGTTTATGTGCTATTCCACTTGATAATTGTTCCAACCGAAATTGGAACACGGAATTCGCAAATTCAACTACAAGGGGTGCCAAAAGTTTCGTTTTTGAACATATTTCTAATGAAATAGAAGAAGAGAATGATCATGGCGTGTCTCATTCTCAAGAGTCGCAACAGGTTCACTTAGGTTCATCTTCAAACTTTACCAAATTTGAAGAGGACCCTATTGTAGATAAGTTAAGAACACAGTTAGGGGTGATTCACCCAATTCCTTCGCCTCCTATTAACAAAAACGTGGTTGGTTTGTTTGTGTTTTTTTTCTTTGTCGGTGTTGTGTTTGATAAGTTGTGGACTTCAAGGAGAAGGAACAAAGTTAGCAGTGAAGATAGTTTGCGTGGCGTGTGGCCGCAGGTACCAACGAGCTTTTCTTTGTTTTTGGAAAAGGATTTGCAGAGAAAAGAGTCAGTTGAATGGGTGAACATGGTGCTTGGGAAGTTATGGAAGGGTTATAGAGGTGGAATTGAGAATTGGATTATTGGGCTGCTTCAGCCTGTTATTGATGACTTGAAGAAACCGGATTATGTGCAGAGGGTTGAGATTAAGCAATTCTCACTGGGGGATGAACCATTGTCTGTTAGGAATGTCGAAAGAAGGACTTCTCGCCGTGTGAATGATTTGCAGTACCAGATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTATTAATGCTATCTCTAAAATTTGGCATTATTCCAATCGTGGTGCCTGTTGGCGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGCGATTAATACCAACAAAACCTTGGGTTGGAGCTGCTTCATGGGCTTTTGTTTCTCTTCCAAAGATCAAGTTTGAATTGTCTCCATTCCGCCTGTTCAATTTAATGGCAATCCCAGTACTCTCAATGTTTTTGACTAAACTTCTCACGGAAGATTTACCCAGACTATTTGTACGCCCGAAGAAAATTGTTTTGGATTTCCAAAAGGGAAAATCAGTTGGTCCTGTTGCTAATGATGTTAAATCTGGAGAGATGCAAGATGGAAACAAAGATTCTGTTGGTGAACTGTCTGTTACCCTTGTGGATGCTCGGAAGCTTTCTTATTTTTTCTATGGCAAGACAGATCCTTATGTTATTCTTAGTCTTGGAAATCAAAGCATACGCAGCAAAAAGAACACTCAAACTACTGTCATTGGGTCTCCTGGAATGCCAATTTGGAATCAAGATTTTCATATGCTTGTCGCCAACCCTAGAAAGCAGAAATTACTTGTCCAAGTTAAGGACTATCTCGGATTTGCATATTTGACGATTGGTACAGGGGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGACAGGATTGTTGTTTTACAAAGCGGTTGGGGAATTTTAGGAAAGGGTTCTTCTGGGGAGATATTACTACGGCTAACATATAAAGCATATGTCGAGGATGAAGAAGATGACAAGACTGTGGTGGATGCCACTGATGTAGAAGCTTCAGATGATGATTTGTCGGATTCAGAAGAAGCGAATGTCATTGATGAGAACAATGAAGAAGATCCTATGTACCGAACTGATAATGAGCCATTTATGGATGTATTGGCAGCATTAATTGTCAGTGAAGAATTCCAAGGAATAGTAGCATCTGAAACTGGGTCTACCAAAATTTTGGATAATAGCTCAAATGCAGGCTCTAAAATATCAAAATCTAAAGTTGCCAATGCTGAATCAATTCCTTCTACTTCTGATAACTCTGAAGGTTTTGTAGGTTCTGCATTGTTTTGGTTTGCTGTGATTACTAGCATATCTCTACTAATTGCACTCAACATTGGGGGTTCAAATTTGTTAAATCCTTGA 2055 0.3981 MILQPASATFTFSHFFHSLCPCNNQVSNFVAFPFSRRRRKRFIAHSGYRKFRRKISLRLCAIPLDNCSNRNWNTEFANSTTRGAKSFVFEHISNEIEEENDHGVSHSQESQQVHLGSSSNFTKFEEDPIVDKLRTQLGVIHPIPSPPINKNVVGLFVFFFFVGVVFDKLWTSRRRNKVSSEDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKGYRGGIENWIIGLLQPVIDDLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTKPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKKIVLDFQKGKSVGPVANDVKSGEMQDGNKDSVGELSVTLVDARKLSYFFYGKTDPYVILSLGNQSIRSKKNTQTTVIGSPGMPIWNQDFHMLVANPRKQKLLVQVKDYLGFAYLTIGTGEVDLGSLKDTVPTDRIVVLQSGWGILGKGSSGEILLRLTYKAYVEDEEDDKTVVDATDVEASDDDLSDSEEANVIDENNEEDPMYRTDNEPFMDVLAALIVSEEFQGIVASETGSTKILDNSSNAGSKISKSKVANAESIPSTSDNSEGFVGSALFWFAVITSISLLIALNIGGSNLLNP* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1845 684 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 205 392 IPR031468 GO:0008289
Lan8g1845 684 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 546 IPR035892 -
Lan8g1845 684 SMART C2_3c 419 520 IPR000008 -
Lan8g1845 684 Gene3D C2 domain 399 547 IPR035892 -
Lan8g1845 684 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 17 684 - -
Lan8g1845 684 Pfam C2 domain 418 513 IPR000008 -
Lan8g1845 684 ProSiteProfiles C2 domain profile. 405 521 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1845 Lan-Chr8 24813542 24819559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1845 410 508 C2H2 Transcription Factor Family AT4G05330 35.354 2.81e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1845 - - adu:107477171 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0087 7 468238 473993 Lan8g1845 8 24813542 24819559 LSH
Lan8g1845 8 24813542 24819559 Lan13g0151 13 908448 913943 LSH