Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1844 ATGGCTCCTAAAAGAGGTGTAAAGGCTCCAGTTGCAGCTGCTAAGAAGAAATCTGTGGCTGAGAAAACGAATCCTCTGTTTGAGAAGCGTCCGAAACAGTTCGGTATCGGAGGAGCATTGCCTCCGAAGAGGGATTTAACCCGATTCGTGAAGTGGCCAAAGACTGTTCAAATTCAGAGAAAGAAGAGGATCCTCAAGCAGAGGTTGAAGGTTCCACCTGCTTTGAATCAGTTCACTAAGACCCTTGACAAGAATCTAGCAACAAGCCTGTTCAAGATACTTCTGAAATACAGGCCTGAGGAGAAGGCAGAAAAGAAGGAAAGGCTTTTGAAAAGGGCCCAAGCAGAAGCTGATGGCAAACCCCTTGAAGCTAAGAAGCCTATTGTTGTCAAGTATGGTCTCAATCATGTTACTTACCTTATTGAGCAGAACAAAGCACAACTTGTTGTGATTGCTCATGATGTGGATCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGTAGGAAGATGGAAATTCCTTACTGCATTGTTAAGGGCAAGGCTCGCTTAGGAACGGTTGTCCATAAGAAAACTGCTTCTGTTCTATGCTTGACCACTGTTAAGAATGAAGACAAATTGGAGTTCAGCAGAGTCCTTGAGGCTATTAAGGCCAACTTCAATGACAAGTATGACGAGTACAGGAAGAAGTGGGGTGGTGGTATCATGGGCTCCAAATCCCAAGCAAAGACCAAGGCTAAAGAAAGGCTTATTGCCAAAGAAGCAGCTCAGAGGCTGAACTAG 783 0.447 MAPKRGVKAPVAAAKKKSVAEKTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEEKAEKKERLLKRAQAEADGKPLEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRLN* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1844 260 PRINTS Ribosomal protein L7A/RS6 family signature 130 144 IPR018492 -
Lan8g1844 260 PRINTS Ribosomal protein L7A/RS6 family signature 149 162 IPR018492 -
Lan8g1844 260 PRINTS Ribosomal protein L7A/RS6 family signature 165 175 IPR018492 -
Lan8g1844 260 PRINTS Ribosomal protein L7A/RS6 family signature 175 189 IPR018492 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 31 48 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 48 65 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 68 87 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 92 105 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 126 146 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 187 211 IPR001921 -
Lan8g1844 260 PRINTS Ribosomal protein L7A family signature 219 239 IPR001921 -
Lan8g1844 260 SUPERFAMILY L30e-like 90 231 IPR029064 -
Lan8g1844 260 ProSitePatterns Ribosomal protein L7Ae signature. 168 185 IPR004037 GO:0042254|GO:1990904
Lan8g1844 260 PANTHER BNAA03G47020D PROTEIN 2 258 - -
Lan8g1844 260 Gene3D - 52 235 IPR029064 -
Lan8g1844 260 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 120 207 IPR004038 -
Lan8g1844 260 MobiDBLite consensus disorder prediction 1 23 - -
Lan8g1844 260 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1844 Lan-Chr8 24810633 24812782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1844 1 260 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.615 1.43e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1844 K02936 - gmx:100819609 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0091 7 492383 494570 Lan8g1844 8 24810633 24812782 LSH
Lan8g1844 8 24810633 24812782 Lan13g0154 13 935207 937297 LSH