Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1842 ATGGTAGCGATCATGCACCACCAACATCAACAACCCTCAACCACTTCCCTTAGGTCTCCACCTTCTCTTTCTCTCACTCCTCACCGCCACCACCACCACCACCTCCCTCTATGCCACTTGGAAAGAGTTCGTTTATCGGATATTGCGCCCTACGATGGGGCACCGGTGGGGCCTTATGTAAGGGCAGTGGAAGCACTTTACGGGTCTCTGATGAGACATAATGCTGTATTGATTGAATTAGGTAGCGATGATGCTTCTCTTATCAGATGCGGGTTGGAGGGTGCTAGGTTGTTTTTCAGAAGTAGGGTTCATCTTGGTGTTGCTCAAGGGAACCGTGGGGTTTATATGTACAGAGCTGGAAGGGCTTTGGAGGATTGGGATTCGTCTCCCCCTTGCATGGCTGATATTTTTAGATGCATGGGAAAGGCGTCTCGTTATGCCTTGTCTGCTATTGCAAGGCATCTGCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATGCCCCATTGCCTGCTAATGAGGTGTCTTCATCAGTTCTTGTTGCAACTTACTCACATGCTTCTTTGCAAAATGGAAAAGGTGCTATTGGAGGCAGTAAGCCTAACTTGAATGGTGAAGTTGAGAAGGGATTGTTGACACTGATTTCTACAGACACCCCTGGTCTTCAGGTATGTGACCCCAACGGCCGCTGGCATTTAGCAGACAGTGGGTCTGGACCTGGAGAACTTTTACTGATAACAGGCAAAGCGCTTAGCCATGCTACTGCAGGTCTTTGTCCTGCTGCATCATATAGAGCTTCTCCCGAATATTTTTTAGGTCCCAATAGTGGCGGAAGGACTTCTCTTGCATATAGACTCATGCCACAGGGCAATGCTATATTAGACTGCTCTCCGATTGCAGCAGCTGGCCATGTTATTCCTCAAAGCTATGTTCCAATATCTGTAAGCCAGTTTATGGATGACCTTGCTGCTGAAGAACTGATAGATAGCAGATGTGATAGTGCCGATGTCGCTCAGAACAATGTGAACAGGGATCCATCATTAAGAAGCGTTCTATCAGATCCTATGTCGGGCGCATTCCTTGAAGATGCCATGTTTGTCTCATGTGGTCATTCATTTGGTGGTCTGATGCTGAGGAGAGTCATTGAAACATCAAGATGTACACTCTGCAACACAGATATTGAGACCAGTTCTTTGATCCCTAATATTGCTTTAAGAGCTGCAGCTGCTGCTGTCAAGCATGAGGATGAACGAAGATTATTTCGTAATGCTGCTCTCCGAAAGCGGCGAAAAGAAATGGGTTACCAAATGGATTCAATGAGAAGAGTGAACAGGGAAAATGGAGATTTTACTGCTACTGATGGACTCCAACGGGGAGTACAATATCCATTTTCGATAAATGAGAAAGTTATTATCAAGGGTAACCGGAGAACACCAGAAAAATTTGTTGGAAAAGAAGCTGTCATTACATCTCAGTGTCTCAATGGCTGGTATTTGCTCGAAATTATTGGAACTGGAGAGAGTGTTCGTCTGCAGTACCGTTCTCTTAAGAAACTCTTAAATTCACCAGCCACAGAGGACCAGTGTCCCTCACAGCCAATTCAAAATAGCAACTCTTAA 1623 0.4553 MVAIMHHQHQQPSTTSLRSPPSLSLTPHRHHHHHLPLCHLERVRLSDIAPYDGAPVGPYVRAVEALYGSLMRHNAVLIELGSDDASLIRCGLEGARLFFRSRVHLGVAQGNRGVYMYRAGRALEDWDSSPPCMADIFRCMGKASRYALSAIARHLRLRSDVFNHLLDDAPLPANEVSSSVLVATYSHASLQNGKGAIGGSKPNLNGEVEKGLLTLISTDTPGLQVCDPNGRWHLADSGSGPGELLLITGKALSHATAGLCPAASYRASPEYFLGPNSGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLAAEELIDSRCDSADVAQNNVNRDPSLRSVLSDPMSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNTDIETSSLIPNIALRAAAAAVKHEDERRLFRNAALRKRRKEMGYQMDSMRRVNRENGDFTATDGLQRGVQYPFSINEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLEIIGTGESVRLQYRSLKKLLNSPATEDQCPSQPIQNSNS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1842 540 Gene3D - 107 348 IPR027443 -
Lan8g1842 540 SUPERFAMILY Clavaminate synthase-like 127 320 - -
Lan8g1842 540 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 31 538 - -
Lan8g1842 540 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 418 IPR013083 -
Lan8g1842 540 MobiDBLite consensus disorder prediction 7 23 - -
Lan8g1842 540 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 31 538 - -
Lan8g1842 540 MobiDBLite consensus disorder prediction 1 29 - -
Lan8g1842 540 SUPERFAMILY RING/U-box 349 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1842 Lan-Chr8 24794504 24801812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1842 349 537 Plant U-box Gene Family AT5G05230 37.949 2.30e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1842 - - lang:109355513 1029.62