Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1831 ATGGCGTTGTCGGCGGCGGTGGTGGTTGACTCAGAGTACACGACGGAGATCGACAAAGCTCGCCGTGATCTCCGTGCACTCATCGCTAACAGGAACTGCGCTCCTCTCATGCTTCGTTTAGCGTGGCACGATGCCGGAACTTACGATGTTAACACCAATACCGGTGGACCTAATGGTTCAATTAGGAATGAGGAAGAGTTTTCTCATGGCTCCAACAATGGCTTGAAGAAAGCTATTGATTTCTGTGAAGAAGTAAAGGTTAAACATCCTAAGATCACATATGCAGATCTTTACCAGCTTGCAGGTGTTGTTGCAGTTGAAGTTACTGGGGGTCCCACAATTAACTTTGTTCCTGGAAGAAGGGATTCTAAAATATCTCCTAAAGAAGGGCGGCTTCCTGATGCCAAAAAAGGTGTGCCACATCTGCGTGATATCTTTTATCGAATGGGCCTGTCCGACAAGGACATTGTTGCTCTGTCTGGAGGACACACGCTGGGAAGAGCACATCCAGAGAGATCAGGTTTTGATGGCCCTTGGACAGAGGATCCCTTGAAGTTTGATAACTCGTATTTCGGGGAACTTTTAAAAGAAGAGTCTGTGGGACTGCTTAAACTTCCAACAGACAAGGCTTTATTGGACGATCCTGAATTTCGCCGTTATGTTGAGCTGTATGCAAAGGACGAGGATGCATTTTTTCGAGATTATGCTGAATCACACAAGAAGCTTTCAGAGCTAGGCTTTGTGCCCTCAAAGGCAGCATCTCCTAAGGATGCGACTGTACTGGCGCAAAGTGCTGTTGGAATTGTAGTTACCGCTGCTGTGGTGATCCTCAGTTACTTGTATGAAGTTCGCAAAAGAGGGAAGTAG 867 0.4671 MALSAAVVVDSEYTTEIDKARRDLRALIANRNCAPLMLRLAWHDAGTYDVNTNTGGPNGSIRNEEEFSHGSNNGLKKAIDFCEEVKVKHPKITYADLYQLAGVVAVEVTGGPTINFVPGRRDSKISPKEGRLPDAKKGVPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTEDPLKFDNSYFGELLKEESVGLLKLPTDKALLDDPEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSKAASPKDATVLAQSAVGIVVTAAVVILSYLYEVRKRGK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1831 288 Gene3D Peroxidase, domain 2 133 239 - -
Lan8g1831 288 PANTHER L-ASCORBATE PEROXIDASE 4, PEROXISOMAL-RELATED 5 288 - -
Lan8g1831 288 ProSiteProfiles Plant heme peroxidase family profile. 34 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 CDD ascorbate_peroxidase 5 247 - -
Lan8g1831 288 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 5 288 IPR044831 GO:0004601|GO:0034599
Lan8g1831 288 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Lan8g1831 288 PRINTS Haem peroxidase superfamily signature 34 48 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Haem peroxidase superfamily signature 92 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Haem peroxidase superfamily signature 110 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 SUPERFAMILY Heme-dependent peroxidases 17 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 Gene3D - 20 246 - -
Lan8g1831 288 ProSitePatterns Peroxidases active site signature. 34 45 IPR019794 GO:0004601
Lan8g1831 288 Pfam Peroxidase 21 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 13 33 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 34 49 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 52 62 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 66 90 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 91 109 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 110 122 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 131 148 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan8g1831 288 PRINTS Plant ascorbate peroxidase signature 223 247 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1831 Lan-Chr8 24731738 24735221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1831 92 246 Peroxidase AT4G17690 34.375 5.81e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1831 K00434 - gmx:100170727 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0111 7 603954 608120 Lan8g1831 8 24731738 24735221 LSH