Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1825 ATGTTAAAGGCAATGAAAGTTGAAAGGAGATTTGTTTTGGTAGGGATTAGAATTGATAGTTATAGCAGACAACTTCTAAACTGGGCTCTTTTCAAACTTGCTCAACCTGGTGACTATGTTATTGCTCTTCATGTAGTTAAAAGTCAAGATTATGTTTCAAAAAACAAGGCCCTTATAAATGGCTACTTAGAGGTTTATGAAGGACTATGTGATGTTAAGAAGGTAGGTCTCATTGGTGAAGTTTTATCAGGGAGCTCTTTTAGAAGCATTCTTGTTAGAGAAGCAAAAATTCATGCTGCTATGGCTCTAGTGGTAGGGGGTAGAAAAACTGCCACAGCAAAATATTGCTCTAAACGACTACCACCAAACACAAATGTTCTGGCCATCCAAGATTCAAGAATTGTCTTCAGTAGGTTCACCTATAATCAATTATCAGGTGGTCTTATGCTGGATCCAAGACCAAGTTTAACAAGCATAGGAAATCTCAGCGACAGAGTAAACCATTCTGAACTCGGTGACTCTGAGGCGGAGGCTGAAAAATCAACAAGCCAAAATAGTATAGAATTGAAGGAGGAAGCATTCGATGGATTAGAGAGGCGCAAGCTAAGATCAATATCTATGTTTGCTGGTGATCCTGCTGAGCAAAATCTTGGTTGGCCTTTACTCCGAAGAGCCAAATCAGAAATCACTGAAACCCATCATGCAAGGGACATGTCAGTAGTGCAATGGGTTATGAGCTTACCAGATCGTTCACCAAAGAGAAGTCATCACTCTTGTTATTCCATTGAGGAAAATTCATCAGAAAGGGGCATTGACATGGAAGATGAGAGCTCTACTAATGGTTCACCTCGATGTGTTGTTGAACTACCTAAAGCACTAGAGGGAAAGTTAATTGTAAATTCACTCAATTGCAAGTGGTTCAGCCTTGAGGTTCTTAAGTCCTGCACTAGCTACTTCTCTTCAGCAAACTTGATTGGGAAAGGGGGGAGCAATCGCGTGTACAAAGGAGTTCTCCCGAATGGGAAGCCAATAGCAGTGAAAGTTTTGAAGTCATCAAAAGAAGCTTGGAAAGATTTTGCTCTTGAGGTGGAAATAATATCCTCATTGGAGCACAAAAACATCACCCCTCTACTAGGCATTTGCGTCGAGGACAATGCGTTAATATCTGTCTATGATTATTTCCACAAAGGGAGCTTAGAGGAAAATCTACATGGCAAAAAGAACGAGAGCGAATCCATCTTGTCATGGGAAATGAGATTCAATGTAGCTGTTGGGATTGCTGAAGCACTAGATTATCTACACAGGGAAACTCTGAAGCCTGTTATACATAGAGATATCAAGTCTTCAAACATTCTTCTTTCCCATGGGTTTGAACCACAATTATCTGATTTTGGACTTGCAATATGGGGACCAACAGCTTCATCCTTTCTGACACAAGAAGACGTCGTAGGAACATTCGGTTATCTCGCTCCCGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTTTATGCCTTTGGTGTAGTGCTACTTGAACTAATATCAGGAAGGGAACCAATCAGTTCAGAACCTTGCAAAGGAGAGGAGAGCTTGGTGTTGTGGGCAAAACCAATAATAGAGAGTGGGGATGTTAAAGGCTTATTAGACCCAAATTTAGAAGGGAAGTTTGATGAGGCTCAAATGCAAAGAATGGTTCTAGCAGCATCTCTATGCATTACACGTGCTGCTAGGCTTCGTCCTAATCTGAACCAGATACTGAAAATCTTAAAAGGAGATGAAAAAGTTGAATATTTCTTGAACTCCCAAGGAGATGATTATGAGCATTCAGAAAATCAAGAAAGTATTGATGATGAAGTGTATCCAAATTCTAGTGCAGAGTTACACTTGAGTTTGGCATTACTTGGTATTGATGATGACACTACATCATATAGTAGCACAGATCACAGCAACAATGAGCACTCGAAAGAAAGATGGAGTAGATCATCAAGTTTTGATTAG 2004 0.4012 MLKAMKVERRFVLVGIRIDSYSRQLLNWALFKLAQPGDYVIALHVVKSQDYVSKNKALINGYLEVYEGLCDVKKVGLIGEVLSGSSFRSILVREAKIHAAMALVVGGRKTATAKYCSKRLPPNTNVLAIQDSRIVFSRFTYNQLSGGLMLDPRPSLTSIGNLSDRVNHSELGDSEAEAEKSTSQNSIELKEEAFDGLERRKLRSISMFAGDPAEQNLGWPLLRRAKSEITETHHARDMSVVQWVMSLPDRSPKRSHHSCYSIEENSSERGIDMEDESSTNGSPRCVVELPKALEGKLIVNSLNCKWFSLEVLKSCTSYFSSANLIGKGGSNRVYKGVLPNGKPIAVKVLKSSKEAWKDFALEVEIISSLEHKNITPLLGICVEDNALISVYDYFHKGSLEENLHGKKNESESILSWEMRFNVAVGIAEALDYLHRETLKPVIHRDIKSSNILLSHGFEPQLSDFGLAIWGPTASSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGEESLVLWAKPIIESGDVKGLLDPNLEGKFDEAQMQRMVLAASLCITRAARLRPNLNQILKILKGDEKVEYFLNSQGDDYEHSENQESIDDEVYPNSSAELHLSLALLGIDDDTTSYSSTDHSNNEHSKERWSRSSSFD* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1825 667 Pfam Protein kinase domain 321 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1825 667 MobiDBLite consensus disorder prediction 651 667 - -
Lan8g1825 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lan8g1825 667 ProSiteProfiles Protein kinase domain profile. 319 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1825 667 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 7 646 - -
Lan8g1825 667 MobiDBLite consensus disorder prediction 251 275 - -
Lan8g1825 667 MobiDBLite consensus disorder prediction 251 282 - -
Lan8g1825 667 Gene3D Transferase(Phosphotransferase) domain 1 394 614 - -
Lan8g1825 667 SUPERFAMILY Protein kinase-like (PK-like) 301 591 IPR011009 -
Lan8g1825 667 CDD USP_Like 12 108 - -
Lan8g1825 667 MobiDBLite consensus disorder prediction 643 667 - -
Lan8g1825 667 SMART serkin_6 319 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1825 667 PANTHER OS08G0249100 PROTEIN 7 646 - -
Lan8g1825 667 Gene3D Phosphorylase Kinase; domain 1 288 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1825 Lan-Chr8 24693511 24697024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1825 306 591 Trihelix Transcription Factor Family AT5G38560 43.493 4.50e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan8g1825 Pkinase 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1825 - - lang:109355495 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1825 8 24693511 24697024 Lan13g0183 13 1132705 1136356 LSH