Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1824 ATGGAGGACGGTGAGCTTGATTTCTCGAACCAGGAAGTGTTTTCAAGTCCAAACATGGCTGATATTCCTAGCAGTGGTTCAATGGACAGTTTCTTCAATGAACTGCTCAAGGACAATGCGCATGCATGCAGTCACACACACACATGCAACCCTCCTGGCCCTGATTTTTCACACACCCACACCTGTTACCATGTCCATACCAAAATTGTGCCTGCTCCGGGTGAAGACCAGGTTGCCACTGATGATACTGCTGAGTCTGCTGAAATGAAGTCTAAAAAGCGTCCCGTGGGTAATCGCGAAGCAGTTCGCAAATACCGTGAGAAGAAAAAAGCTCGCACTGCGTCTCTGGAGGATGAGGTTGTCAAATTGAGAGCTTTGAATCAGCACTTGATGAAGAAGTTGCAAGGTCAGGCTGTTTTAGAGGCAGAGGTTGCAAGGCTAAAGTGCTTGCTTGTTGACATCCGGGGTAGGATTGAAGGAGAAATTGGATCGTTTCCATATCAGAAACCGGCTAATTCAAATCCGCCAATCCCGAACATTCCGGGTTCTTATGTAGTGAACCCTTGTAACATGCAGTGTGATGACCAAGTGTATTGCCTTCATCCAGTAGCAGATGGAAGGGTCACAGAAGGTTCAACACTGAATGGGGAAGGATTTAATGGTTGTGAATTTGAGAATCTCCAGTGTGAGTCAGGGCTCAAGGATCATCATAGTCATGGTGTTGGACAAACATTGTCCAATGTCCGTTCTCCTGCATCAAATAAAAGAAAAGGGAGATCTCGTGCAGCGACTGCTGGTTGA 801 0.4657 MEDGELDFSNQEVFSSPNMADIPSSGSMDSFFNELLKDNAHACSHTHTCNPPGPDFSHTHTCYHVHTKIVPAPGEDQVATDDTAESAEMKSKKRPVGNREAVRKYREKKKARTASLEDEVVKLRALNQHLMKKLQGQAVLEAEVARLKCLLVDIRGRIEGEIGSFPYQKPANSNPPIPNIPGSYVVNPCNMQCDDQVYCLHPVADGRVTEGSTLNGEGFNGCEFENLQCESGLKDHHSHGVGQTLSNVRSPASNKRKGRSRAATAG* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1824 266 MobiDBLite consensus disorder prediction 233 266 - -
Lan8g1824 266 Coils Coil 106 126 - -
Lan8g1824 266 Gene3D - 78 154 - -
Lan8g1824 266 MobiDBLite consensus disorder prediction 83 104 - -
Lan8g1824 266 PANTHER BASIC LEUCINE ZIPPER 23 1 238 - -
Lan8g1824 266 SUPERFAMILY Leucine zipper domain 90 135 IPR046347 GO:0003700|GO:0006355
Lan8g1824 266 SMART brlzneu 86 153 IPR004827 GO:0003700|GO:0006355
Lan8g1824 266 Pfam Basic region leucine zipper 88 140 IPR004827 GO:0003700|GO:0006355
Lan8g1824 266 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 238 - -
Lan8g1824 266 CDD bZIP 92 145 - -
Lan8g1824 266 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 135 IPR004827 GO:0003700|GO:0006355
Lan8g1824 266 MobiDBLite consensus disorder prediction 73 108 - -
Lan8g1824 266 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1824 Lan-Chr8 24690162 24692756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1824 1 265 bZIP Transcription Factor Family AT4G35040 60.902 1.21e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g1824 bZIP_2 3.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1824 K25785 - gmx:780549 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0115 7 665413 667430 Lan8g1824 8 24690162 24692756 LSH
Lan8g1824 8 24690162 24692756 Lan13g0184 13 1137364 1139710 LSH