LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan8g1819	ATGGCCACCGCTACTTCACAAAACCTCTCTCTCTCTTCCTCTTCCTCCACCCTCTCTCTCTACAAAACCCTCCCTAAACCCTCTTCTCTCCCTCTCCCCCGCCGCACCCACGAATCCCCACTCGCCGCGTCCCACAACAACCCCATCTCCGATATCGTCTTGTCCAAAACGCCACACCGCGACGATGACGACAAGCCACGCGAGGAGTGCGGCGTCGTTGGTATCTACGGCGACCCAGAGGCCTCTCGTCTCTGCTACCTCGCGCTTCACGCGCTTCAACATCGCGGCCAAGAAGGCGCCGGTATCGTCACCGTTAATAACAATGTGCTACAATCGATTACCGGCGTTGGTCTTGTCTCCGATGTGTTCAATGAAACCAAGCTTGATCAGTTACCTGGTGATTTAGCCATTGGTCATGTTCGTTATTCCACTGCGGGTCAATCCATGCTTAAAAATGTTCAACCTTTTGTTGCAAGTTACCGGCTTGGTTCTGTTGGGGTTGCCCATAATGGGAATTTGGTAAATTACCGAACTTTGAGGGCAAAGCTTGAAGAAAACGGTTCTATTTTTAACACTACTTCTGATACTGAGGTTGTGCTTCACCTTATTGCTACCTCAAAGCATAAACCTTTTATTTTGAGGATTATTGATGCTTGTGAGAAAATTGAAGGTGCTTATTCTATTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTTAGGGACCCACATGGGTTTAGACCTTTGGTTATGGGGAGAAGGGCTAATGGTGCTGTTGTTTTCGCCTCCGAGACTTCTGCACTTGATTTGATTGAGGCCACTTATGAGAGGGAAGTGTACCCTGGTGAGGTTATTGTTGTGGATAAAGATGGGGTTCAGTCACTTTGTTTAATGTCCCATCCACAACCAAAGCAGTGTGTTTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTCGGGAGGTCCGTGTATGAATCGCGAAGGCAGTTTGGGGAAATTTTGGCTACTGAGAGCCCTGCTGATTGTGATGTTGTGATAGCAGTGCCTGATTCTGGTGTTGTTGCTGCTCTTGGTTATGCTGCGAAGGCCGGTGTTCCTTTTCAGCAGGGGCTGATTAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGAGACTTCGGTGTGAAGCTTAAGTTGTCGCCTGTTCGTGCGGTTCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGATTCTATTGTGAGGGGAACTACATCATCCAAGATAGTGAGGCTGCTCAAGGAGGCAGGTGCTAAGGAAGTTCACATGAGGATTGCAAGTCCACCGATAATCGGTTCATGTTATTATGGAGTGGACACGCCAAGCTCGGAGGAGTTGATTTCTAATAGGATGACTGTGGAAGAGATAAGAGAGTTTATTGGATCAGACTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGGGGTATTTGGGGAACGACTCTCCTAATTTCTGTTATGCTTGTTTCTCTGGGAATTACCCGGTCGAGCCTAGGGAGCTTAAAGTTAAAAGGGTTGGTGACTTTGTCGATGATGGCTTAAATGGGAGTTTGGAAACAATTGATGGAGGCTGGGTTAAAGCAAACAGAAATCTAAAAGAAGTGAAGGTTGTTGATACTTAG	1671	0.4656	MATATSQNLSLSSSSSTLSLYKTLPKPSSLPLPRRTHESPLAASHNNPISDIVLSKTPHRDDDDKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNETKLDQLPGDLAIGHVRYSTAGQSMLKNVQPFVASYRLGSVGVAHNGNLVNYRTLRAKLEENGSIFNTTSDTEVVLHLIATSKHKPFILRIIDACEKIEGAYSIVFVTEDKLVAVRDPHGFRPLVMGRRANGAVVFASETSALDLIEATYEREVYPGEVIVVDKDGVQSLCLMSHPQPKQCVFEHIYFALPNSVVFGRSVYESRRQFGEILATESPADCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMTVEEIREFIGSDSLAFLPFDSLKGYLGNDSPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVKANRNLKEVKVVDT*	557

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan8g1819	556	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	70	511	IPR029055	-
	Lan8g1819	556	PANTHER	AMIDOPHOSPHORIBOSYLTRANSFERASE	25	543	-	-
	Lan8g1819	556	SUPERFAMILY	PRTase-like	305	516	IPR029057	-
	Lan8g1819	556	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	70	293	IPR029055	-
	Lan8g1819	556	CDD	PRTases_typeI	332	443	IPR000836	-
	Lan8g1819	556	CDD	GPATase_N	70	320	IPR035584	-
	Lan8g1819	556	Pfam	Phosphoribosyl transferase domain	340	439	IPR000836	-
	Lan8g1819	556	MobiDBLite	consensus disorder prediction	1	24	-	-
	Lan8g1819	556	Hamap	Amidophosphoribosyltransferase [purF].	69	510	IPR005854	GO:0004044\|GO:0009113
	Lan8g1819	556	Gene3D	-	329	493	IPR029057	-
	Lan8g1819	556	PANTHER	AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC	25	543	-	-
	Lan8g1819	556	MobiDBLite	consensus disorder prediction	1	68	-	-
	Lan8g1819	556	TIGRFAM	purF: amidophosphoribosyltransferase	70	511	IPR005854	GO:0004044\|GO:0009113
	Lan8g1819	556	PIRSF	Pur1	66	524	IPR005854	GO:0004044\|GO:0009113
	Lan8g1819	556	Pfam	Glutamine amidotransferase domain	148	267	IPR017932	-
	Lan8g1819	556	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	70	289	IPR017932	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan8g1819	Lan-Chr8	24659329	24661438	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan8g1819	55	543	PRT Gene Family	AT2G16570	84.444	0.0	858

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan8g1819	K00764		-	gmx:100801720	934.095