Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1807 ATGGGAGAGGTGGCGCGTGGAGGTTGTTGTCCTCCGATGGATCTCTTCCGTTCCGAGTCGATGCAACTCGTTCAACTCATCATTCCAATCGAATCCGCTCATCTCACCGTTTCTTATCTCGGTGATCTTGGCCTCCTTCAATTCAAAGATCTTAATACAGATAAAAGCCCTTTTCAACGGACTTATGCTGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAGCAAATGTCGAAGGCAGATGTTTTACCAGTACATTCTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCAGAAATTGAGTCAGAGTTAACCGAGATGAATGCAAATGGCGAAAAGTTGCAACGCTCTTACAATGAACTTGTGGAGTATAAACTTGTTCTTGAGAAGGCTGGTGAGTTTTTCCACACTGCTCAAAGCCGTGCCATAGAGCAGCAGAGAGAAAATGAATCACGCCAACTGGTTGATGAATCTTTGGAAACACCTTTATTGCAAGACCAAGATTTTGTAGGTGATTCATCGAAGCAAGTTAAATTGGGGTTTTTAGCTGGTCTTGTTGCCAGGGAAAAGTCTGTGGCATTTGAGAGAATTTTATTTCGTGCCACCAGAGGCAATGTGTTTTTGAGGCAGGCTGCTGTTGAGAATCCTACCACAGACCCGGTTACTGGAGAAAAGACTGAGAAAAATGTGTTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGTGACGCCTTTGGTGCTAATCGTTACCCTTTTGCAGAGGATGTTGGAAAACAAACTGAAATGACAAAAGAGGTATCCCGAAGAATTTTAGAATTGAAGACAACAATAGATGCTGGACTGCTGCATCGGGCTACCTTGCTACAGACTATTGGTGCTCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAAAAATCTATTTACCATACCCTGAACATGCTAAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGATCCAGGATGCTTTACACCGGGCAGCAATTGACGCAAACTCTCAAGTTAGTGCCATTTTGCAAGTTCTGCATACTAGGGAGTTGCCACCTACATATTTCCGCACAAACAAATTTACTTCTTCATTTCAAGGAATTATTGATTCATATGGGGTTGCGAAGTATCAAGAGGCAAATCCTACTGTGTACACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGTGATTGGGGACATGGAATATGTATACTACTAGCTGCTCTATATTTCATAATTCGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGAGATGACTTTTGGAGGCCGTTATGTTATTTTTATGATGGCACTCTTTTCAATCTACACCGGTGTGATATATAATGAGTTCTTCTCTGTCTCATTTAAAATCTTTGGTCCTTCTGCGTATGAATGTCGTGATCTGTCTTGCACGGAAGCTACAACAGTGGGCCTGATAAAAGCACGCCGTACTTACCCATTTGGTGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTTAACTCTTTGAAAATGAAAATGTCTATTCTCCTTGGGGTTGCTCAAATGAACCTAGGAATTATGATGAGCTTTTGTAATGCTAAATTCTTTAAGAACAGCGTAAATGTATGGTTCCAGTTTGTTCCCCAGATAATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTATCATATATTGATCTACATGTTCCTGAGCCCTACAGATGATTTGGGTGAAAACCAACTCTTTGTTGGTCAGAAATATCTGCAGCTTGTGCTTTTGATTCTGGCCTTTATTGCTGTGCCTTGGATGCTGCTCCCAAAACCTTTTATTTTGAAGAAGCAACATGAAAATAGGCACGGGGTTGAATCTTATGCACCACTTCAAACGACAGAGGAGAGCTTGCAAGTAGAGTCAAATCATGATTCCCATGGTCATGGGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACCATAGAATTCGTACTTGGAGCAGTTTCAAATACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCTCATTCGGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTAATGGCATGGGGGTACAATAATGTGGTTATCCTGATAATTGGTCTGATTGTGTTTATTTTCGCTACTGTTGGAGTGTTGCTTGTGATGGAAACATTGAGTGCCTTCTTGCATGCTTTACGTCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCACCCTTTCTCCTTCTTATTGGTAGAAGATGAGGATGAGTGA 2460 0.4118 MGEVARGGCCPPMDLFRSESMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNTDKSPFQRTYAAQIKRCGEMARKLRFFKEQMSKADVLPVHSTTVVDVNIDDLEVKLAEIESELTEMNANGEKLQRSYNELVEYKLVLEKAGEFFHTAQSRAIEQQRENESRQLVDESLETPLLQDQDFVGDSSKQVKLGFLAGLVAREKSVAFERILFRATRGNVFLRQAAVENPTTDPVTGEKTEKNVFVVFYAAEKAKSKILKICDAFGANRYPFAEDVGKQTEMTKEVSRRILELKTTIDAGLLHRATLLQTIGAQFEQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALHRAAIDANSQVSAILQVLHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICILLAALYFIIREKKLSSQKLDDITEMTFGGRYVIFMMALFSIYTGVIYNEFFSVSFKIFGPSAYECRDLSCTEATTVGLIKARRTYPFGVDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIMMSFCNAKFFKNSVNVWFQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHILIYMFLSPTDDLGENQLFVGQKYLQLVLLILAFIAVPWMLLPKPFILKKQHENRHGVESYAPLQTTEESLQVESNHDSHGHGEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVVILIIGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFLLVEDEDE* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1807 819 PANTHER VACUOLAR PROTON ATPASES 5 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan8g1807 819 Coils Coil 101 128 - -
Lan8g1807 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
Lan8g1807 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan8g1807 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1807 Lan-Chr8 24581044 24590276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1807 13 819 Primary Pumps ATPases(2) AT4G39080 76.667 0.0 1295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1807 K02154 - gmx:100810062 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0134 7 805912 814927 Lan8g1807 8 24581044 24590276 LSH