Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1802 ATGGCTTCTTCGAGTGGAACATCTTCAGGGTCATCACTGATTCAGAACTCAGGTTCTGAAGAGGACTTGGTTGCATTGATGGATCAAAGGAAAAGGAAGAGGATGTTATCAAACCGTGAATCAGCAAGGAGATCTAGAATGAGGAAACAAAAACACTTGGATGATCTAGTTTCACAAGTGGATCAGCTTAGGAAAGAGAATCAGCAAATACTCACAAGTGTCAACATCACTACACAACAATACATGAGTGTTGAGGCTGAAAACTCAGTGCTGAGGGCTCAAGTTGAAGAACTAAGCCACAGGTTAGAGTCATTGAATGAGATCATTGACTACTTGAATGCCAGCACTGGTGTGTTTGGATCTGCAGCAGCATCAACAATGGGGAACTTCGATATTGGGCCAAGTGATAGCTTCTTTAACCCAATGGACATGGCTTATATGAACATGCCTATTATGGCTTCTGCAGACATGTTGCAGTATTGA 483 0.4224 MASSSGTSSGSSLIQNSGSEEDLVALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNASTGVFGSAAASTMGNFDIGPSDSFFNPMDMAYMNMPIMASADMLQY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1802 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Lan8g1802 160 MobiDBLite consensus disorder prediction 1 52 - -
Lan8g1802 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Lan8g1802 160 MobiDBLite consensus disorder prediction 24 52 - -
Lan8g1802 160 MobiDBLite consensus disorder prediction 1 19 - -
Lan8g1802 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Lan8g1802 160 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Lan8g1802 160 Coils Coil 46 73 - -
Lan8g1802 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lan8g1802 160 Coils Coil 81 115 - -
Lan8g1802 160 Pfam bZIP transcription factor 30 82 IPR004827 GO:0003700|GO:0006355
Lan8g1802 160 Gene3D - 28 83 - -
Lan8g1802 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Lan8g1802 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1802 Lan-Chr8 24555765 24556697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1802 25 160 bZIP Transcription Factor Family AT4G34590 58.865 1.27e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g1802 bZIP_1 2.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1802 K25786 - gmx:100101862 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1802 8 24555765 24556697 Lan13g0216 13 1359795 1360914 LSH