Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1790 ATGGCTTCAAGTTCTCTGAGCAAACAAAAGCCTTGTGATTCATCATGGACACCAAAACAAAACAAATTGTTTGAAAGAGCACTTGCAAAATATGATAAGGATACCCCTGACCGGTGGCATAATGTAGCAAAAGCTGTTGGTGGAAAATTACCTGATGAAGTTAAGAAGCACTATGAAATTCTTTTGGAAGATCTCAGACACATAGAGTCTGGTCGTGTTCCAATTCCCAACTACAAATCATCAATTAACACCACCAATGTTGATGAAGAAGAGAGGCTACTGAAGTATCTGAAGTTGAATTGA 303 0.3828 MASSSLSKQKPCDSSWTPKQNKLFERALAKYDKDTPDRWHNVAKAVGGKLPDEVKKHYEILLEDLRHIESGRVPIPNYKSSINTTNVDEEERLLKYLKLN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1790 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lan8g1790 100 CDD SANT 15 62 IPR001005 -
Lan8g1790 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Lan8g1790 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lan8g1790 100 SMART sant 12 64 IPR001005 -
Lan8g1790 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Lan8g1790 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Lan8g1790 100 Gene3D - 9 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1790 Lan-Chr8 24480304 24481928 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan8g1790 Myb_DNA-binding 8.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1790 - - gmx:100798314 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1790 8 24480304 24481928 Lan13g0234 13 1453699 1455062 LSH