Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1768 ATGGATAAGGACAAGTTTCCTGTTCATGGCGGAGGTTTCCCACCTCCCTCAGCCCGCTTTTCCGGCTATTCGTCCACTGCAACCCCATTTAATGTGAGGACAGAGCCATCCTCTTCAACCTCGTCGTATCCTCCATTGGTTGACTCTGCTAGTGCTAGCTTTGTTCATGATATTAGCAGAATGCCTGATAATCCCCCAAAAAATAGAGGCCATCGACGCGCTCATTCTGAGATTCTCACCCTACCTGATGATATTAGCTTCGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCCTCGTTCTCTGATGAAACCGAGGAAGACTTATTGTCCATGTATCTTGATATGGATAAATTCATTTCATCATCTGCTACATCACCGTTTCAAATTGGTGAGCCATCTACTGCTGCTGCAGCACCAACTTCAGGAACCCCTGCCTCATCTGCAGACGACATTGTTGTTGGTACTAATCAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCCATGGATGGGTCAACAACCATCAAAACAGAGATGCTGGTCTCAGGTTCTGAAGACATATCTGGAGCTGATGCCAAAAAGTCATTGTCAGCTGCCAAGCTTGCTGAACTTGCTTTGGTTGATCCTAAGCGTGCTAAAAGGATATGGGCAAATAGACAGTCTGCCGCAAGGTCAAAAGAAAGGAAGATGCGCTACATTTCTGAGCTTGAAAGGAAGGTGCAGACACTGCAAACAGAAGCTATATCCTCGTCTGCACAATTAACTCTCTTGCAGAGAGATACAACTGGAGTTTCCACTGAGAACAGTGAGTTGAAATTGAGGTTGCAAACAATGGAGCAACAAGTTCACTTGCAAGATGCATTGAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAAGTATTGACTGGGCAAAGTATGCCAAATGGAGGAGCAATGAATTTTGCCTCGTATGGAGGGGGGCAACAATTCTATTCAACCAACAATCAGTCCATGCACACTCTTTTAGCTGCTCAACAGCTTCAACAACTTCAAATTCATTCCCAGAAGAAGCATCAGCATCAACATCAGTTTCTTCAGCAGCAACATCAGTTTCAACAGCATCAACTACAGCAGCAGCAACAACCGCAACAGCAGCAGCCACAACAACATCAACAGCAGCAACAGGAACAGTAG 1182 0.4552 MDKDKFPVHGGGFPPPSARFSGYSSTATPFNVRTEPSSSTSSYPPLVDSASASFVHDISRMPDNPPKNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFISSSATSPFQIGEPSTAAAAPTSGTPASSADDIVVGTNQRPRVRHQHSQSMDGSTTIKTEMLVSGSEDISGADAKKSLSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEAISSSAQLTLLQRDTTGVSTENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQSMPNGGAMNFASYGGGQQFYSTNNQSMHTLLAAQQLQQLQIHSQKKHQHQHQFLQQQHQFQQHQLQQQQQPQQQQPQQHQQQQQEQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1768 393 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 366 - -
Lan8g1768 393 CDD bZIP_plant_RF2 213 262 IPR044759 GO:0003700|GO:0006355
Lan8g1768 393 MobiDBLite consensus disorder prediction 19 45 - -
Lan8g1768 393 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 273 IPR004827 GO:0003700|GO:0006355
Lan8g1768 393 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 366 - -
Lan8g1768 393 MobiDBLite consensus disorder prediction 1 45 - -
Lan8g1768 393 Pfam bZIP transcription factor 212 248 IPR004827 GO:0003700|GO:0006355
Lan8g1768 393 MobiDBLite consensus disorder prediction 349 393 - -
Lan8g1768 393 SUPERFAMILY Leucine zipper domain 212 263 IPR046347 GO:0003700|GO:0006355
Lan8g1768 393 MobiDBLite consensus disorder prediction 126 152 - -
Lan8g1768 393 Gene3D - 211 264 - -
Lan8g1768 393 Coils Coil 277 297 - -
Lan8g1768 393 MobiDBLite consensus disorder prediction 360 393 - -
Lan8g1768 393 Coils Coil 228 255 - -
Lan8g1768 393 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1768 Lan-Chr8 24338510 24343178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1768 19 340 bZIP Transcription Factor Family AT1G06070 70.060 8.02e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g1768 bZIP_1 6.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1768 - - jre:109005463 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1768 8 24338510 24343178 Lan13g0276 13 1760312 1764738 LSH
Lan6g2166 6 32088984 32096573 Lan8g1768 8 24338510 24343178 PCT
Lan10g0312 10 2057823 2061248 Lan8g1768 8 24338510 24343178 PCT
Lan3g0249 3 1616618 1620690 Lan8g1768 8 24338510 24343178 PCT
Lan8g1768 8 24338510 24343178 Lan6g2166 6 32088984 32096573 PCT
Lan8g1768 8 24338510 24343178 Lan10g0312 10 2057823 2061248 PCT
Lan8g1768 8 24338510 24343178 Lan3g0249 3 1616618 1620690 PCT