Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1751 ATGGACCATGACAAGACTGGATGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCGTTAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAGTGCCACAAAGACATGATGCTCAAAGAGGAGCAGGCCAAGCTTGCAGCATCATCCTTTGGTAATATTATGAATGGATCATCAAGCAGCACTACAACTGAATCTGTTGCTGCCAAGGTGGATGTCCCGGTAAATGCAGTGGAGCCTAAACCTATCTCTGTGCAACCTTCATTTGCTTTCGGTTCAGGGGAGAGTGGTGATACAAAGCCAAAGGACGGTCCAAAGCGTTGCCTTAGCTGCAATAAGCGGGTTGGTTTGACGGGGTTTAATTGTCGTTGTGGTAACCTTTTCTGTGCTGTACATCGCTACTCAAACAAGCATGATTGCCCATTTGATTACCGCACTGCTGGACGGGATGCCATAGCTAAAGCAAACCCAGTTATCAAGGCTGAGAAGCTTGATAAGATATAA 516 0.4574 MDHDKTGCQAPPEGPILCVNNCGFFGSAATMNMCSKCHKDMMLKEEQAKLAASSFGNIMNGSSSSTTTESVAAKVDVPVNAVEPKPISVQPSFAFGSGESGDTKPKDGPKRCLSCNKRVGLTGFNCRCGNLFCAVHRYSNKHDCPFDYRTAGRDAIAKANPVIKAEKLDKI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1751 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Lan8g1751 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Lan8g1751 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 171 - -
Lan8g1751 171 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 171 - -
Lan8g1751 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Lan8g1751 171 Pfam AN1-like Zinc finger 114 148 IPR000058 GO:0008270
Lan8g1751 171 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Lan8g1751 171 Gene3D - 4 72 - -
Lan8g1751 171 SUPERFAMILY AN1-like Zinc finger 101 166 IPR035896 -
Lan8g1751 171 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Lan8g1751 171 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Lan8g1751 171 Gene3D - 95 167 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1751 Lan-Chr8 24188529 24190629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1751 8 171 C2H2 Transcription Factor Family AT3G52800 44.242 1.51e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1751 - - qsu:112019098 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0209 7 1302925 1305340 Lan8g1751 8 24188529 24190629 LSH