Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1745 ATGAGGAAGCCTGAGGCATCATCTGATAGAAACAAGAAGAAGCTTAGAAAGGGTTTGTGGTCACCAGAAGAAGATGAAAAGCTCATGAACTATATGTTAAAGAATGGACAACGTTGTTGTTGGAGTGATGTGGCTAGAAATGCTGGTCTGCAAAGATGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTACTTGAGACCTGATCTTAAACGAGGTGCTTTCTCACCCCAAGAAGAGGAACTCATCATTCATTTGCATTCTCTCCTTGGAAACAGATGGTCTCAAATAGCTGTCCGATTACCTGGACGTACCGACAATGAAATTAAGAACTATTGGAATTCAACAATAAAGAAAAGGGTGAAGGATGTGTCCTCCTCAAGATCACCAAAGGAAAGTGACTTCTCATTATATGACCCTAACAACAAGGACCTCAATATTGGAGGGTTTACTTCTACTATGCAACATTATCAACATGTTGAATTTATGCCTATGTTCAATTCATCATCTCCTTCACCATCAATTCAAGCCACAGTTCTCAACTCCATAATTGAAAGTTTACCTATGCTAGAGCATGGAATAAACATGCCAGCTGGTGGTGGATTCTTCAATGGAATAATTGACAACAACAAAGGTTTTGTGGATATGTTTGTTCCTTCCCTAGAGAGTGTTAGCACTACTTCTGACCATAACCTCAAAGTGGAGAATGCATGCAACAACATAGATACTAACAATAATAGTTACCTTAATAACTCCATTAATAAGATCAAAGCTGAGAATAGAAATGGGGTGGATAATTTATTTCAAGAAGAGTTAGCTATGGGAGATTGGGACTTGGAGGAGTTTATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTTCAAACTGGTGA 891 0.3861 MRKPEASSDRNKKKLRKGLWSPEEDEKLMNYMLKNGQRCCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAVRLPGRTDNEIKNYWNSTIKKRVKDVSSSRSPKESDFSLYDPNNKDLNIGGFTSTMQHYQHVEFMPMFNSSSPSPSIQATVLNSIIESLPMLEHGINMPAGGGFFNGIIDNNKGFVDMFVPSLESVSTTSDHNLKVENACNNIDTNNNSYLNNSINKIKAENRNGVDNLFQEELAMGDWDLEEFMKDVSSFPFLDFSNW* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1745 296 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lan8g1745 296 Pfam Myb-like DNA-binding domain 17 65 IPR001005 -
Lan8g1745 296 SUPERFAMILY Homeodomain-like 15 112 IPR009057 -
Lan8g1745 296 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lan8g1745 296 CDD SANT 20 65 IPR001005 -
Lan8g1745 296 Gene3D - 8 70 - -
Lan8g1745 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Lan8g1745 296 ProSiteProfiles Myb-like domain profile. 12 65 IPR001005 -
Lan8g1745 296 PANTHER MYB TRANSCRIPTION FACTOR 7 294 - -
Lan8g1745 296 SMART sant 16 67 IPR001005 -
Lan8g1745 296 SMART sant 70 118 IPR001005 -
Lan8g1745 296 Gene3D - 72 137 - -
Lan8g1745 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lan8g1745 296 PANTHER MYB DOMAIN PROTEIN 55 7 294 - -
Lan8g1745 296 CDD SANT 73 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1745 Lan-Chr8 24152085 24155170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1745 1 293 MYB Transcription Factor Family AT3G08500 45.797 4.94e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan8g1745 Myb_DNA-binding 6.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1745 K09422 - gmx:100785810 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1745 8 24152085 24155170 Lan13g0304 13 1975412 1997398 LSH
Lan10g0342 10 2301256 2303256 Lan8g1745 8 24152085 24155170 PCT
Lan8g1745 8 24152085 24155170 Lan10g0342 10 2301256 2303256 PCT