Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1721 ATGGGTAACGGCGTCGGAAAATTAACACCGTGTTTCACCGGTAACGGTGGACGCCGAAAGCATAATGAAATTTCCGTTTGCATAACGGAGCCACTAGACGAGGGTCTTGGTCACTCTTTCTGTTACGTTCGACCCGACCCGACTCGTCTATCATCTTCCAAGGTCCACTCAGAAGAAACGACGACGTTCAGAACAATCTCTGGTGCATCGGTGAGTGCCAATACATCAACGCCACTCTCAACCGCTTTCGTTGATTTATACTCATACGGTTCAATTGATCGAGCCGCGGCATTCGAATCTTCAACCTCCTTCGCTTCACTTCCACTTCAACCTATACCTAAAGTTTTAATGAATTCGGGTCCTTTCTCCGGTAACCTAACCGGTTTTCACGGTTCGGGTCCGATCGAGCGCGGGTTCTTATCCGGTCCGATCGAGCGCGGGTTCATGTCCGGTCCGATTGAGAAGGATGTTAACGGTTTAGATCAGTTTCAGAGAAGCTTCTCTCATGGTGGATTAGGTTTCGGATCCAGATTCGGGTTCGGGTTTAATCATAGAAAACATAAGGGTGGGTGGATTAGGGTTCTTCAGAGAGCGATATCGAAGACTTTGTCACGTGGACAGAAATCAATTGTTGCACCGATGAAAGGTGTGGTGGTGAAGGAACAAGAGTGGGTTGTTGTGGCGGAGAAGCAGAATCATAACGAGAATTTGATAGTGAATAGTTTGAATTTCAGTAGTGAGGGTAGTTTGGAAGACGATGTTTTGATGGAAAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTCCACGTCGTGGTTTCGGAGGAACACGGTTGGATTTTCGTGGGGATTTACGATGGTTTCAATGGTCCCGATGCACCTGATTACCTTCTCTCGAATCTGTACACCTTTCTCCACAAAGAATTGAAGGGCTTGCTGTGGGATGATAATTCTGAACAAGTTAATGTGAAGGAGAATCGGAATTTGGAAGTGCAAGAAGTTGATGATTGTTCTCAGTGTTTTGATAATAACAATCGTCCTTGCACAAGTGGCGATGCTGCAAATTTTGATGATTGTTGCAAGAGAAAGAAGGTCAAGAGTCGCAAGAATAAGTACAAAGGCATTGCGAATAAATGGGAGGAGAATCAGAGAAGGTGGAAGTGTGAGTGGGATAGGGAAAGAGTTGAACTTGATAGAAGATTGAAGGAACAGTTAACTCGATCTAATTTCAGTGGGAAGAATACTAGCTCAATTAACCATTTAGATGTGTTGGAAGCTCTTTCTAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGCTGCTGATAAGATGGTAATGGAGAATCCTGAATTAGCTTTGATGGGTTCGTGTGCGCTTGTGATGTTAATGAAAGGAGAGGATGTATATGTGATGAATGTAGGAGATAGTAGAGCTGTGTTGGCACAAAAGGTGGAGCCTGATTATTGGCTTGGGAAGGTTAGGCAGGACTTGGAGAGGATCAATGAAGAAACCATGAATGATCTTGATGAATCTTGGGATGATGCTGATATATCAAGCTTGGTTCCCACTCTAAGTGCACTCCAGCTTACCAAGGATCATAGTACTAGTGTTGAAGAAGAAGTCCAGAGAATAAGAAATGAACACCCCGATGATCCTTGTGCAGTAGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCGCTTCTGGAGATGTTTAGAATAGACTACGTTGGTACTTCTCCTTACATAAGCTGCCAACCATATCTAAAACACCACAGGTTAGGCCCCAAGGACAAATTTTTGATCTTATGCTCAGATGGTCTGTATCAATACATGTCAAACGAAGAAGCGGTTGCAGAAGTTGAGCTTTTCATCACATTGCAACCTGAGGGAGACCCCGCTCAGCATTTGGTTGAAGAAGTCTTATTTCGTGCTGCAAAGAAAGCAGGTTTGGACTTCCATGAGTTGCTTGAAATTCCACAAGGCGATAGGCGTCGCTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGGAGGATATGGAGATCATGTGTATAA 2127 0.4438 MGNGVGKLTPCFTGNGGRRKHNEISVCITEPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGSIDRAAAFESSTSFASLPLQPIPKVLMNSGPFSGNLTGFHGSGPIERGFLSGPIERGFMSGPIEKDVNGLDQFQRSFSHGGLGFGSRFGFGFNHRKHKGGWIRVLQRAISKTLSRGQKSIVAPMKGVVVKEQEWVVVAEKQNHNENLIVNSLNFSSEGSLEDDVLMESQNLQWAQGKAGEDRVHVVVSEEHGWIFVGIYDGFNGPDAPDYLLSNLYTFLHKELKGLLWDDNSEQVNVKENRNLEVQEVDDCSQCFDNNNRPCTSGDAANFDDCCKRKKVKSRKNKYKGIANKWEENQRRWKCEWDRERVELDRRLKEQLTRSNFSGKNTSSINHLDVLEALSRALRKTEESYLDAADKMVMENPELALMGSCALVMLMKGEDVYVMNVGDSRAVLAQKVEPDYWLGKVRQDLERINEETMNDLDESWDDADISSLVPTLSALQLTKDHSTSVEEEVQRIRNEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTSPYISCQPYLKHHRLGPKDKFLILCSDGLYQYMSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1721 708 PANTHER - 12 708 - -
Lan8g1721 708 SUPERFAMILY PP2C-like 267 700 IPR036457 -
Lan8g1721 708 SMART PP2C_4 254 697 IPR001932 -
Lan8g1721 708 PANTHER PROTEIN PHOSPHATASE 2C 12 708 IPR015655 GO:0004722|GO:0006470
Lan8g1721 708 Coils Coil 428 448 - -
Lan8g1721 708 Gene3D - 229 704 IPR036457 -
Lan8g1721 708 ProSiteProfiles PPM-type phosphatase domain profile. 253 699 IPR001932 -
Lan8g1721 708 Pfam Protein phosphatase 2C 425 655 IPR001932 -
Lan8g1721 708 CDD PP2Cc 401 699 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1721 Lan-Chr8 24013574 24016236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1721 1 708 PP2C-type Phosphatase Gene Family AT2G28890 66.713 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1721 - - pvu:PHAVU_011G064200g 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0239 7 1492292 1495559 Lan8g1721 8 24013574 24016236 LSH
Lan8g1721 8 24013574 24016236 Lan13g0327 13 2153622 2156977 LSH