Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1715 ATGGCGAAGACACTTATTTCATATTCATCTTCATTCATAGCCACACCACTTCCTTCGCTCTCTCGCAACTTACCTCATCGCATCACAACCAAGCTCAACTTCAGCTTCCACCATATTCCCCCAATTCAATCCATACACAACTCCATAGACTTCATTGAAATTGTTACAAGAACTGAAGGCATTCTATACACGCTCGCTGATGCAACCGTCGCGGTAGCAGATTCGACTACAGCAGTTTCCGGCGATGCCGCTGTTCAAAAAAACGGAGGCTGGTTCGGCTTTATCGCCGAAGCCATGGAATTTGTTCTTAAGGTGTTAAAGGATGGTCTCACGGCAGTGCACTTGCCTTATGCATATGGATTTGCTATTATTCTGCTCACTGTCATTGTTAAGGCTGCTACACTTCCATTGACAAAGCAACAGGTTGAATCAACACTGGCTATGCAAAATCTTCAACCAAAACTTAAGGCCATTCAAGAAAAATATGCTGGCAACCAGGAAAGAATACAACTTGAGACATCAAGACTATATAATAAGGCCGGGGTTAACCCTTTGGCAGGTTGTTTACCGACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGTTAACAGAAGGGTTCCTTTGGATCCCCTCTTTGGGTGGTCCTACTAGTATTGCAGCTAGACAGAGTGGATCTGGAATTTCATGGCTTTTTCCATTTGTGGATGGTCATCCACCATTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTCGTTTCTCAATATGTTTCCATGGAAATCATGAAACCTCCTCAGACAAATGATCCTAATCAGAAGAATACACTTCTGATTGTCAAGTTTCTTCCTCTCATGATTGGTTACTTCTCACTGTCTGTCCCATCAGGGCTTACAATTTACTGGTTTACAAACAATGTCTTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTTGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCTAGTGGAATTATCACTGCGGGACGTGCTAAAAGATCTGGTGAAAAGTTTAGGCAATTTAAAGATGAGGAGAGCAAAAAAAAGTTAGGCAAAGCACTGCCAGTTGATGAAGTTCAACCTCTAGCTTCTGATTCTGACGATGGCTCGAATGAAGGAAGTAACAAGGTACAGGAAGTTGCAGAAAAATCTTACGCTTCTACAGTTAGCGAAGAGGTTCCGAGTAGGGAAAGAAGAAGCAAGCGTTCAAAGCGGAAAGGTGCTGTATAA 1299 0.4273 MAKTLISYSSSFIATPLPSLSRNLPHRITTKLNFSFHHIPPIQSIHNSIDFIEIVTRTEGILYTLADATVAVADSTTAVSGDAAVQKNGGWFGFIAEAMEFVLKVLKDGLTAVHLPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKLKAIQEKYAGNQERIQLETSRLYNKAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTNDPNQKNTLLIVKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKFGGAKPVVNENASGIITAGRAKRSGEKFRQFKDEESKKKLGKALPVDEVQPLASDSDDGSNEGSNKVQEVAEKSYASTVSEEVPSRERRSKRSKRKGAV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1715 432 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 119 332 IPR028055 -
Lan8g1715 432 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 424 - -
Lan8g1715 432 MobiDBLite consensus disorder prediction 359 432 - -
Lan8g1715 432 Pfam 60Kd inner membrane protein 119 333 IPR001708 GO:0016021|GO:0032977
Lan8g1715 432 MobiDBLite consensus disorder prediction 387 414 - -
Lan8g1715 432 PANTHER OXA1 1 424 IPR001708 GO:0016021|GO:0032977
Lan8g1715 432 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1715 Lan-Chr8 23970434 23975508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1715 24 382 Chloroplast and Mitochondria Gene Families AT2G28800 66.043 1.69e-174 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1715 K03217 - gmx:100817173 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0246 7 1549269 1554823 Lan8g1715 8 23970434 23975508 LSH