Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1708 ATGCGAATAACCAATAACACTCTTCTTCTTTTCCATAATTCTCCCTTAGCTCGATTGCTATGCACGCGCCATTCATCTCCCAAATTATTCGTCGCAGGGCTTTCCTACGATACGAATGAAACTGTTCTAAGAGATGCATTTGGGCAGCATGGTGAAATCATTGAAGCTAAGGTAATTTGTGATCATGTAACTGGAAAATCAAAAGGGTATGGATTTGTGCGCTTCATTTCTGAATTTGAAGCTGTCACATCTCGCAAACAAATGCACGGCCAGATGTTGGATGGAAGACGCATTCGTGTGAGTTATGCGCACAAAGCATAA 321 0.4174 MRITNNTLLLFHNSPLARLLCTRHSSPKLFVAGLSYDTNETVLRDAFGQHGEIIEAKVICDHVTGKSKGYGFVRFISEFEAVTSRKQMHGQMLDGRRIRVSYAHKA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1708 106 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 99 IPR000504 GO:0003723
Lan8g1708 106 PANTHER GLYCINE-RICH RNA-BINDING-LIKE PROTEIN-RELATED 6 105 - -
Lan8g1708 106 SMART rrm1_1 28 101 IPR000504 GO:0003723
Lan8g1708 106 Gene3D - 17 106 IPR012677 -
Lan8g1708 106 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 6 105 - -
Lan8g1708 106 SUPERFAMILY RNA-binding domain, RBD 25 104 IPR035979 GO:0003676
Lan8g1708 106 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 105 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1708 Lan-Chr8 23933907 23934928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1708 29 105 Eukaryotic Initiation Factors Gene Family AT3G16380 42.857 2.89e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1708 K13195 - gmx:100306540 152.525